BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17698 (UTR included)
(2950 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A2A11 307 5e-83
BF14_1707_C1 196 1e-49
>BF01056A2A11
Length = 778
Score = 307 bits (155), Expect = 5e-83
Identities = 155/155 (100%)
Strand = Plus / Plus
Query: 2796 taccatcattactttacttctctgatatatattttttaaagaatgtaccattctctatat 2855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 taccatcattactttacttctctgatatatattttttaaagaatgtaccattctctatat 69
Query: 2856 ttatatatggtgtgtataaggctttaattcttttctattattatttattgagctttcatt 2915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 ttatatatggtgtgtataaggctttaattcttttctattattatttattgagctttcatt 129
Query: 2916 aacatcagtcgagacctggtggtcaggtctccttg 2950
|||||||||||||||||||||||||||||||||||
Sbjct: 130 aacatcagtcgagacctggtggtcaggtctccttg 164
>BF14_1707_C1
Length = 760
Score = 196 bits (99), Expect = 1e-49
Identities = 102/103 (99%)
Strand = Plus / Minus
Query: 1 cacatattcagctgaattactaagatgactataaagaaatattttaaaaagcaatattga 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 103 cacatattcagctgaattactaagatgactataaagaaatattttaataagcaatattga 44
Query: 61 aaagccctgagaataatctgtactactgagttgaatgaaagct 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 aaagccctgagaataatctgtactactgagttgaatgaaagct 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 283,902
Number of extensions: 6067
Number of successful extensions: 6067
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6067
Number of HSP's successfully gapped: 2
Length of query: 2950
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2932
Effective length of database: 8,109,745
Effective search space: 23777772340
Effective search space used: 23777772340
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)