BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17706 (UTR included)
(2053 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031A2E06 1292 0.0
>BF01031A2E06
Length = 672
Score = 1292 bits (652), Expect = 0.0
Identities = 667/672 (99%)
Strand = Plus / Plus
Query: 703 attacacaatcaccaccaagttataccactgctatattattaatctctttgtattttacc 762
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 1 attacacaatcaccaccaagttatactactgctatattataaatctctttgtattttacc 60
Query: 763 gttctgtgggggcatttgtacttggtatcagtaatagtactaagtttagcactcaagata 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttctgtgggggcatttgtacttggtatcagtaatagtactaagtttagcactcaagata 120
Query: 823 taaatacctcagatgctagtgactacatattcttacctcaagaactgaaatggaaaacat 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taaatacctcagatgctagtgactacatattcttacctcaagaactgaaatggaaaacat 180
Query: 883 ttcgatctatcgtccccaatgagagccatcacataaaatcctactgcttttctagaaatg 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcgatctatcgtccccaatgagagccatcacataaaatcctactgcttttctagaaatg 240
Query: 943 atcttgaaatcattgccgataagggtttatgcattcctattgcaatagatacaaatccac 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcttgaaatcattgccgataagggtttatgcattcctattgcaatagatacaaatccac 300
Query: 1003 tatgtcttttggatattggagctgtccagctgataaaatcaaaccacaatttgtctgagt 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatgtcttttggatattggagctgtccagctgataaaatcaaaccacaatttgtctgagt 360
Query: 1063 tgctccagaaagataaaaattttacaatgataagcataagtggaagaaaatacgaaataa 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgctccagaaagataaaaattttacaatgataagcataagtggaagaaaatacgaaataa 420
Query: 1123 ataagattgtgctactggcccatagtcctgtgttaagagaaattgttaggaatacaaatt 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ataagattgtgctactggcccatagtcctgtgttaagagaaattgttaggaatacaaatt 480
Query: 1183 ctaatacattgatgcttgatattgacgacagcaagatggagattctattggaatatctgt 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctaatacattgatgcttgatattgacgacagcaagatggagattctattggaatatctgt 540
Query: 1243 atacgggcaccatccatgacatcgtgccacagaaacatgactccatatttggtgtagccg 1302
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 541 atacgggcaccatccatgacatcgtgccacagaaacatgactccatatttggtgtagctg 600
Query: 1303 aacaattccaactggataaccttaagatactccagaacgtgatctgtgagcagatgaata 1362
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 601 aacaattccaactagataaccttaagatactccagaatgtgatctgtgagcagatgaata 660
Query: 1363 ttaataatgcta 1374
||||||||||||
Sbjct: 661 ttaataatgcta 672
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 336,532
Number of extensions: 6895
Number of successful extensions: 6895
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6895
Number of HSP's successfully gapped: 1
Length of query: 2053
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2036
Effective length of database: 8,119,229
Effective search space: 16530750244
Effective search space used: 16530750244
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)