BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17707 (UTR included)
(1666 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_801_C1 1507 0.0
>BF14_801_C1
Length = 798
Score = 1507 bits (760), Expect = 0.0
Identities = 766/768 (99%)
Strand = Plus / Plus
Query: 495 agaaaaatgagcagttcggaggaggtatcatggatttcatggttctgtggtttacggggg 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 agaaaaatgagcagttcggaggaggtatcatggatttcatggttctgtggtttacggggg 90
Query: 555 aacgagtatttctgcgaggtggatgaagattacataaatgataaatttaacttgacgggt 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 aacgagtatttctgcgaggtggatgaagattacataaatgataaatttaacttgacgggt 150
Query: 615 ttaaatgagcaagtcccacactacagacaagcacttgatatggtcctagacttagagcct 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 ttaaatgagcaagtcccacactacagacaagcacttgatatggtcctagacttagagcct 210
Query: 675 gatgatgacctcgacgacaatccaaaccaatcagacttagtagagcaagccgcggaagtg 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gatgatgacctcgacgacaatccaaaccaatcagacttagtagagcaagccgcggaagtg 270
Query: 735 ctctatggcttaattcatgctcggtatattttaacaaacagaggtattggacagatggtc 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ctctatggcttaattcatgctcggtatattttaacaaacagaggtattggacagatggtc 330
Query: 795 gaaaagttccaaagcggtgactttggtcattgcccgcgtgtttactgcgagtgtcaagcc 854
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gagaagttccaaagcggtgactttggtcattgcccgcgtgtttactgcgagtgtcaagcc 390
Query: 855 acacttccgataggtctctctgatgttccgggcgaggcgatggtgaagctctactgtcct 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 acacttccgataggtctctctgatgttccgggcgaggcgatggtgaagctctactgtcct 450
Query: 915 cgctgtatggacgtgtacacgcccaagtcctcgcgccaccaccacacggacggagccttc 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cgctgtatggacgtgtacacgcccaagtcctcgcgccaccaccacacggacggagccttc 510
Query: 975 ttcggcaccggtttccctcacatgttgttcatggtgcacccggagaccaggcccaagcgc 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ttcggcaccggtttccctcacatgttgttcatggtgcacccggagaccaggcccaagcgc 570
Query: 1035 cccgcatcacagtttgtgcctagattgtacggattcaagatccatccaatggcttaccag 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 cccgcatcacagtttgtgcctagattgtacggattcaagatccatccaatggcttaccag 630
Query: 1095 ctccaacagcaggccgcggtgaacttcaaagctccgctccgcttggtgtcgttcaataac 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ctccaacagcaggccgcggtgaacttcaaagctccgctccgcttggtgtcgttcaataac 690
Query: 1155 ggtaaacgttaggagcgagccagcgacactctttggtacagattcctccggcgagatgct 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ggtaaacgttaggagcgagccagcgacactctttggtacagattcctccggcgagatgct 750
Query: 1215 gttgaatctaatgcgtcctttgtaaatcatttggcaaccaatcggctg 1262
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 attgaatctaatgcgtcctttgtaaatcatttggcaaccaatcggctg 798
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 217,445
Number of extensions: 5189
Number of successful extensions: 5189
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5189
Number of HSP's successfully gapped: 1
Length of query: 1666
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1649
Effective length of database: 8,119,229
Effective search space: 13388608621
Effective search space used: 13388608621
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)