BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17711 (UTR included)
(2014 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013B2G08 1255 0.0
>BF01013B2G08
Length = 655
Score = 1255 bits (633), Expect = 0.0
Identities = 650/655 (99%), Gaps = 1/655 (0%)
Strand = Plus / Plus
Query: 386 acgaaagcacgctcttcgtaatttaattgtaggggtagctgttttggtggcatattttaa 445
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 acgaaagcacgctcttcgtaatttaattgtcnnggtagctgttttggtggcatattttaa 60
Query: 446 gaattgttatttgcgactagtttaattgatgcgataagtattatattaagtaaaaatgag 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaattgttatttgcgactagtttaattgatgcgataagtattatattaagtaaaaatgag 120
Query: 506 tgaaattgaagattacaatcaacagaaaccaggaaaaacaagcaagcagcataacatatt 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaaattgaagattacaatcaacagaaaccaggaaaaacaagcaagcagcataacatatt 180
Query: 566 accaatatggggtaatgagcagactatgaatctgaatcctttaatattagcgaatattca 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accaatatggggtaatgagcagactatgaatctgaatcctttaatattagcgaatattca 240
Query: 626 aggttctagctacttcaaagtgcatctgttcaagttgaaaacatatcacgaggttgttga 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggttctagctacttcaaagtgcatctgttcaagttgaaaacatatcacgaggttgttga 300
Query: 686 cgagatctactaccaggtgaaacacctcgagccttgggagcgtggaagccggaagactgc 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgagatctactaccaggtgaaacacctcgagccttgggagcgtggaagccggaagactgc 360
Query: 746 cggccagacgggcatgtgtggcggcgtcagaggggtaggtgcagggggcattgtttctac 805
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggccagacgggcatgtgtggcggcgtcagaggggtaggtgcagggggcattgtttctac 420
Query: 806 agctttctgtcttctctacaagttatatacactgcggctaactcgcaagcaagtcaatgg 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agctttctgtcttctctacaagttatatacactgcggctaactcgcaagcaagtcaatgg 480
Query: 866 tcttctgcagcacacagattcgccatacattagagcacttggttttatgtacatacgcta 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcttctgcagcacacagattcgccatacattagagcacttggttttatgtacatacgcta 540
Query: 926 cacacagcctccagctgacttgtttgactggtatgtcgactacctggacgatgaagagga 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cacacagcctccagctgacttgtttgactggtatgtcgactacctggacgatgaagagga 600
Query: 986 ggttgacccccgtgctggaggtgggggctc-tactaccataggcgctcttgtgag 1039
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 601 ggttgacccccgtgctggaggtgggggctcttactaccataggcgctcttgtgag 655
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 264,363
Number of extensions: 6318
Number of successful extensions: 6318
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6317
Number of HSP's successfully gapped: 1
Length of query: 2014
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1997
Effective length of database: 8,119,229
Effective search space: 16214100313
Effective search space used: 16214100313
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)