BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17714 (UTR included)
(1276 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051B1H06 886 0.0
BF01033B2H04 872 0.0
BF14_217_C1 821 0.0
>BF01051B1H06
Length = 780
Score = 886 bits (447), Expect = 0.0
Identities = 453/455 (99%)
Strand = Plus / Plus
Query: 312 ggcacgtaaaataacctcaaaatatttgaacactaaccatacagagtattatcataattt 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 ggcacgtaaaataacctcaaaatatttgaacactaaccatacagagtattatcataattt 73
Query: 372 tctgttcatcagtgacattcgtgaattataaaaacagtagagttgcttgcgttgcttaat 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 tctgttcatcagtgacattcgtgaattataaaaacagtagagttgcttgcgttgcttaat 133
Query: 432 tcattgcattaaattcgacataaagtgttacatacgtgtgaatctgtcaaaaacgaaagt 491
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tcattgcattagattcgacataaagtgttacatacgtgtgaatctgtcaaaaacgaaagt 193
Query: 492 taaggacaaatgttcgttttggtgggctgtcaacgggcagcccccaaatattgtgccatt 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 taaggacaaatgttcgttttggtgggctgtcaacgggcagcccccaaatattgtgccatt 253
Query: 552 atgtggtggtatatatttttctgtgtagtttttactaaaacaattgaagtgcttggtaca 611
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atgtggtggtatatatttttgtgtgtagtttttactaaaacaattgaagtgcttggtaca 313
Query: 612 aatgcaaccggatcaatccaagtcggcaatgtatgttcccaaaagcagttccagtgtgcg 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aatgcaaccggatcaatccaagtcggcaatgtatgttcccaaaagcagttccagtgtgcg 373
Query: 672 aacgggaagtgtataccaatagcttgggtgtgcgagggagacgacgactgcggcgacaaa 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aacgggaagtgtataccaatagcttgggtgtgcgagggagacgacgactgcggcgacaaa 433
Query: 732 tcagatgaaaatatagaagaatgtaagaaaggtaa 766
|||||||||||||||||||||||||||||||||||
Sbjct: 434 tcagatgaaaatatagaagaatgtaagaaaggtaa 468
>BF01033B2H04
Length = 863
Score = 872 bits (440), Expect = 0.0
Identities = 449/452 (99%)
Strand = Plus / Plus
Query: 311 tggcacgtaaaataacctcaaaatatttgaacactaaccatacagagtattatcataatt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tggcacgtaaaataacctcaaaatatttgaacactaaccatacagagtattatcataatt 68
Query: 371 ttctgttcatcagtgacattcgtgaattataaaaacagtagagttgcttgcgttgcttaa 430
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ttctgttcatctgtgacattcgtgaattataaaaacagtagagttgcttgcgttgcttaa 128
Query: 431 ttcattgcattaaattcgacataaagtgttacatacgtgtgaatctgtcaaaaacgaaag 490
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ttcattgcattagattcgacataaagtgttacatacgtgtgaatctgtcaaaaacgaaag 188
Query: 491 ttaaggacaaatgttcgttttggtgggctgtcaacgggcagcccccaaatattgtgccat 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttaaggacaaatgttcgttttggtgggctgtcaacgggcagcccccaaatattgtgccat 248
Query: 551 tatgtggtggtatatatttttctgtgtagtttttactaaaacaattgaagtgcttggtac 610
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tatgtggtggtatatatttttgtgtgtagtttttactaaaacaattgaagtgcttggtac 308
Query: 611 aaatgcaaccggatcaatccaagtcggcaatgtatgttcccaaaagcagttccagtgtgc 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aaatgcaaccggatcaatccaagtcggcaatgtatgttcccaaaagcagttccagtgtgc 368
Query: 671 gaacgggaagtgtataccaatagcttgggtgtgcgagggagacgacgactgcggcgacaa 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gaacgggaagtgtataccaatagcttgggtgtgcgagggagacgacgactgcggcgacaa 428
Query: 731 atcagatgaaaatatagaagaatgtaagaaag 762
||||||||||||||||||||||||||||||||
Sbjct: 429 atcagatgaaaatatagaagaatgtaagaaag 460
>BF14_217_C1
Length = 909
Score = 821 bits (414), Expect = 0.0
Identities = 417/418 (99%)
Strand = Plus / Plus
Query: 345 taaccatacagagtattatcataattttctgttcatcagtgacattcgtgaattataaaa 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 taaccatacagagtattatcataattttctgttcatcagtgacattcgtgaattataaaa 61
Query: 405 acagtagagttgcttgcgttgcttaattcattgcattaaattcgacataaagtgttacat 464
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 62 acagtagagttgcttgcgttgcttaattcattgcattagattcgacataaagtgttacat 121
Query: 465 acgtgtgaatctgtcaaaaacgaaagttaaggacaaatgttcgttttggtgggctgtcaa 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 acgtgtgaatctgtcaaaaacgaaagttaaggacaaatgttcgttttggtgggctgtcaa 181
Query: 525 cgggcagcccccaaatattgtgccattatgtggtggtatatatttttctgtgtagttttt 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cgggcagcccccaaatattgtgccattatgtggtggtatatatttttctgtgtagttttt 241
Query: 585 actaaaacaattgaagtgcttggtacaaatgcaaccggatcaatccaagtcggcaatgta 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 actaaaacaattgaagtgcttggtacaaatgcaaccggatcaatccaagtcggcaatgta 301
Query: 645 tgttcccaaaagcagttccagtgtgcgaacgggaagtgtataccaatagcttgggtgtgc 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgttcccaaaagcagttccagtgtgcgaacgggaagtgtataccaatagcttgggtgtgc 361
Query: 705 gagggagacgacgactgcggcgacaaatcagatgaaaatatagaagaatgtaagaaag 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gagggagacgacgactgcggcgacaaatcagatgaaaatatagaagaatgtaagaaag 419
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 169,116
Number of extensions: 3429
Number of successful extensions: 3429
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3429
Number of HSP's successfully gapped: 3
Length of query: 1276
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1259
Effective length of database: 8,119,229
Effective search space: 10222109311
Effective search space used: 10222109311
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)