BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17721 (UTR included)
(1897 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020B2E01 1457 0.0
>BF01020B2E01
Length = 739
Score = 1457 bits (735), Expect = 0.0
Identities = 738/739 (99%)
Strand = Plus / Plus
Query: 369 tgctgttaccctcacgcgagtcggggtaaaagttgttcggtgatcgcgtgatcgtagtca 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgctgttaccctcacgcgagtcggggtaaaagttgttcggtgatcgcgtgatcgtagtca 60
Query: 429 actaaattcgaccaagtggcgatgttttctagaacttgattcgggacttttatagtttat 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actaaattcgaccaagtggcgatgttttctagaacttgattcgggacttttatagtttat 120
Query: 489 ttgtaaattaaaatggcgggaccgtatttgtcaccgttgccgggggaccttctgaccgag 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgtaaattaaaatggcgggaccgtatttgtcaccgttgccgggggaccttctgaccgag 180
Query: 549 tacatgttcggcagacgacggcagagacggaacaggacgactttcactccgcagcagttg 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacatgttcggcagacgacggcagagacggaacaggacgactttcactccgcagcagttg 240
Query: 609 agcgagctggagtcattattccagaagactcattaccctgatgtgttcctcagggaagaa 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agcgagctggagtcattattccagaagactcattaccctgatgtgttcctcagggaagaa 300
Query: 669 gtcgcgttgagaatcagtctatctgaagcgagagtgcaagtctggtttcaaaatcgacga 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtcgcgttgagaatcagtctatctgaagcgagagtgcaagtctggtttcaaaatcgacga 360
Query: 729 gctaaatggcgtaagcaagctcgcctccagcttttgcaggacgcctggagaatgaggtgt 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctaaatggcgtaagcaagctcgcctccagcttttgcaggacgcctggagaatgaggtgt 420
Query: 789 ttggggctcgggacacctcctcttggactgccaggtcacacaaaaccacctgaatcgtca 848
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttggggctcgggacaccacctcttggactgccaggtcacacaaaaccacctgaatcgtca 480
Query: 849 ccagaaggaggggaatcgccgccacccaaagacaatttagaaacacagtctaatgaaaac 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccagaaggaggggaatcgccgccacccaaagacaatttagaaacacagtctaatgaaaac 540
Query: 909 agtgctggtatgaaatcaccccaacaggagacttaccaccataacggaaatatgtccgac 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agtgctggtatgaaatcaccccaacaggagacttaccaccataacggaaatatgtccgac 600
Query: 969 aatctacccctgccccatgacataccaccccccatgccgtacggcaacgacgacaggata 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aatctacccctgccccatgacataccaccccccatgccgtacggcaacgacgacaggata 660
Query: 1029 cttcaacagccaccgttcccgttcccgccattactgatgccccagcagatggacaacaac 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cttcaacagccaccgttcccgttcccgccattactgatgccccagcagatggacaacaac 720
Query: 1089 gaaatagcgccaactgact 1107
|||||||||||||||||||
Sbjct: 721 gaaatagcgccaactgact 739
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 246,558
Number of extensions: 5874
Number of successful extensions: 5874
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5874
Number of HSP's successfully gapped: 1
Length of query: 1897
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1880
Effective length of database: 8,119,229
Effective search space: 15264150520
Effective search space used: 15264150520
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)