BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17722 (UTR included)
(1444 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038A1A03 1649 0.0
>BF01038A1A03
Length = 856
Score = 1649 bits (832), Expect = 0.0
Identities = 850/856 (99%)
Strand = Plus / Plus
Query: 543 actcgaagaggtctcactcagaatttagagagattagacaaccgtaaagagtctcatagg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actcgaagaggtctcactcagaatttagagagattagacaaccgtaaagagtctcatagg 60
Query: 603 aaatcttcagactccgacaatggggaaattctaagcatgcctaagccagtatttcattcc 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatcttcagactccgacaatggggaaattctaagcatgcctaagccagtatttcattcc 120
Query: 663 aatggaaaaaagacagtacatcaaagaatacagcacaatgtgatcacaccacagcatgaa 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatggaaaaaagacagtacatcaaagaatacagcacaatgtgatcacaccacagcatgaa 180
Query: 723 gaaatgattagatatataagcgaaacctggacacaaacatccaatgctgatagcgagccc 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaatgattagatatataagcgaaacctggacacaaacatccaatgctgatagcgagccc 240
Query: 783 tccacaccaacaagtacaattggctccggcagttcatctccagctccatcaaccctgtac 842
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 241 tccacaccaacaagtacaattggctccggcagttcatctccagctccgtcaaccctgtac 300
Query: 843 tatcaggatccaccgagtgccgaactagaaaacttcacgccctttgacctcgagacctgg 902
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 301 tatcaggatccaccgagtgccgaactagaaaacttcacgccctttgaccttgagacctgg 360
Query: 903 tggggaaaacgtctcttccacaacataaccaattcaatatagaaaatatcgtaagtacaa 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggggaaaacgtctcttccacaacataaccaattcaatatagaaaatatcgtaagtacaa 420
Query: 963 tcaattgcaaattactaaattttataaatgtttacattaaatatttttgtggagttttca 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcaattgcaaattactaaattttataaatgtttacattaaatatttttgtggagttttca 480
Query: 1023 tgagtatgatctgtacagggatgctttaagtttagtaatatacagttgattgtggatctc 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgagtatgatctgtacagggatgctttaagtttagtaatatacagttgattgtggatctc 540
Query: 1083 agttatgatgttaaggaaattttccaaagctcaattatttgcaactggctttgcattgaa 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agttatgatgttaaggaaattttccaaagctcaattatttgcaactggctttgcattgaa 600
Query: 1143 ccaatattctttaagattgttgttttatttggatgttttgttcctgttttttgcctttaa 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccaatattctttaagattgttgttttatttggatgttttgttcctgttttttgcctttaa 660
Query: 1203 atgtatattgtaccgcagactatactgacatatgaagtaccaaagagtttttaatcaaat 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 661 atgtatattgtaccgcagactatactgacatatgaagtaccaaagagtttttattcaaat 720
Query: 1263 gtaaccaaatattacagatcatgttatttttattatgtacattgttaaattatttatata 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtaaccaaatattacagatcatgttatttttattatgtacattgttaaattatttatata 780
Query: 1323 tacatcaagcaatattaaacgaaatgtattgttatgtactcgctcatacatatagactat 1382
|||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||
Sbjct: 781 tacatcaagcaatattaaacgaaatgtattgttatgtactcgcttatacatagaaactat 840
Query: 1383 catcacattatatctg 1398
||||||||||||||||
Sbjct: 841 catcacattatatctg 856
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 212,627
Number of extensions: 5018
Number of successful extensions: 5018
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5018
Number of HSP's successfully gapped: 1
Length of query: 1444
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1427
Effective length of database: 8,119,229
Effective search space: 11586139783
Effective search space used: 11586139783
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)