BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17734 (UTR included)
(2100 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031A2C09 1241 0.0
BF01007X1F06 1051 0.0
>BF01031A2C09
Length = 677
Score = 1241 bits (626), Expect = 0.0
Identities = 663/677 (97%)
Strand = Plus / Plus
Query: 228 gttgcgcggtattgcgtgatccatttaatggtttagtgtttaatatggcaaaaggtgata 287
||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 gttgcccgttattgcgtgatccatttaatggtttagtgtttaatatggctaaaggtgata 60
Query: 288 aagagttagaaaaacctattgtgaacaatgaattacctaatccggagtgtcgtagcaccg 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagagttagaaaaacctattgtgaacaatgaattacctaatccggagtgtcgtagcaccg 120
Query: 348 ataatgaagactcagaatccacacaagagcaacctctggatatcggagagcattatttag 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataatgaagactcagaatccacacaagagcaacctctggatatcggagagcattatttag 180
Query: 408 tgcggcgttccgatgagtcatggcacccggctgagattatacagacgcggtacaacgccg 467
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 181 tgcggcgttccgatgagtcatggcacccggctgagattatacagacgcgatacaacgccg 240
Query: 468 cggaatcgtgttatgaatattatgtacattatgttggatacgatagaaggcttgacgaat 527
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 241 cggaatcgtgttatgaatattatgtacattatgttggctacgatagaaggcttgacgaat 300
Query: 528 gggtttcccgccaccgggttatgtctgatagatttgacgtctgtgaaaattctaataaca 587
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gggtttcccgccgccgggttatgtctgatagatttgacgtctgtgaaaattctaataaca 360
Query: 588 acataaactcagatcatttgctcaccgacaagtcgggccgcaaaataacacgcaatcaaa 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 361 acataaactcagatcatttgctcaccgacaagtcgggccgcaaaataacacgcaatccaa 420
Query: 648 aacgtaaacatgatgaaatcaatcatgttcagaagtcttatgctgagatggatcctacga 707
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 aacgtaaacatgatgaaatcgatcatgttcagaagtcttatgctgagatggatcctacaa 480
Query: 708 cagcggctttggagaaggaacacgaagctattaccaaagttaaatacatcgataggatac 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagcggctttggagaaggaacacgaagctattaccaaagttaaatacatcgataggatac 540
Query: 768 agataggtaaatacgagattgacacttggtacttcagcccctatcccgatgaatacggaa 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agataggtaaatacgagattgacacttggtacttcagcccctatcccgatgaatacggaa 600
Query: 828 aacagtcgaaactatggatttgtgaatattgtttgaaatacatgcgtatggagaaaacat 887
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aacagtnnnnnctatggatttgtgaatattgtttgaaatacatgcgtatggagaaaacat 660
Query: 888 atagataccatctgagc 904
|||||||||||||||||
Sbjct: 661 atagataccatctgagc 677
>BF01007X1F06
Length = 599
Score = 1051 bits (530), Expect = 0.0
Identities = 559/569 (98%)
Strand = Plus / Plus
Query: 993 tttattgtcagaatttgtgtttactggcaaaattgtttttagaccacaaaactctttatt 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 tttattgtcagaatttgtgtttactggcaaaattgtttttagaccacaaaactctttatt 90
Query: 1053 ttgatatcgagcagtttctattttacatcctatgtgaggttgataagcatggggcgcatc 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 ttgatatcgagcagtttctattttacatcctatgtgaggttgataagcatggggcgcatc 150
Query: 1113 ttgttggatatttttcaaaagaaaaggactcgccagaaggcaataatgttgcctgtatac 1172
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 151 ttgttggatatttttcacaagaaaaggactcgccagaaggcaacaatgttgcctgtatac 210
Query: 1173 taacattaccaccataccaaagacagggttatggtaagttgctcattgctttcagctatg 1232
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 211 taacattaccaccataccaaagacagggttatggaaagttgctcattgctttcagctatg 270
Query: 1233 aactatcgagactagagcaagtagttggcagccctgaaaagccattatcagacttgggga 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aactatcgagactagagcaagtagttggcagccctgaaaagccattatcagacttgggga 330
Query: 1293 agctcagttatagatcttattggtcatatgtattattggaggtgttaagtgcgagtcgcg 1352
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 331 agctcagttatagatcttatgggtcatatgtattattggaggtgttaagtgcgagtcgag 390
Query: 1353 gtacactaagtatcaaggacttgagtcagatgactgggatatcacagaccgatattatat 1412
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 391 gtacacttagtatcaaggacttgagtcagatgactgggatatcncagaccgatataatat 450
Query: 1413 ccacattacaatcaatgaacatggttaaatattggaaaggacagcatgtgatctgtgtca 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ccacattacaatcaatgaacatggttaaatattggaaaggacagcatgtgatctgtgtca 510
Query: 1473 caccaaagatagtagcggaacagctagcgagttcgcatttcaagaagcctcggttatgtg 1532
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 511 caccaaagatagtagcggaacagctagcgagttcccatttcaagaagcctcgattatgtg 570
Query: 1533 tcgacccctccgcattgagatggacgcct 1561
|||||||||||||||||||||||||||||
Sbjct: 571 tcgacccctccgcattgagatggacgcct 599
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 243,163
Number of extensions: 4394
Number of successful extensions: 4394
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4393
Number of HSP's successfully gapped: 2
Length of query: 2100
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2083
Effective length of database: 8,119,229
Effective search space: 16912354007
Effective search space used: 16912354007
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)