BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17735 (UTR included)
(3499 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027B1A11 979 0.0
>BF01027B1A11
Length = 712
Score = 979 bits (494), Expect = 0.0
Identities = 568/597 (95%), Gaps = 23/597 (3%)
Strand = Plus / Plus
Query: 634 ctggttgtgagttagttcagagaggtactacaaaaattgacgccacattacctgagctgg 693
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 116 ctggttgtgagttagttcagagaggtaccacaaaaattgacgccacattacctgagctgg 175
Query: 694 gtgtcaaagaggtgactccaaatggaacttggttggagcaaaaacagatacaggcagcta 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gtgtcaaagaggtgactccaaatggaacttggttggagcaaaaacagatacaggcagcta 235
Query: 754 tagaagctagaaaaaaattgatcgaaatacaacgtatcga----aaaaaa---------- 799
|||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 236 tagaagctagaaaaaaattgatcgaaatacaacgtatcgaaaaaaaaaaatcaatatgat 295
Query: 800 ---------aggagccatgagtcatgcggtatggaaagataatttaaagcttgccgaagt 850
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tattaatagaggagccatgagtcatgcggtatggaaagataatttaaagcttgccgaagt 355
Query: 851 tacccataaagtgggtggtcattggcaacacatgggacacaacataggaaagcaacttta 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tacccataaagtgggtggtcattggcaacacatgggacacaacataggaaagcaacttta 415
Query: 911 tattagagccgaagaaattttatttttgatggaacttaattgtctatatttcaaattcaa 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tattagagccgaagaaattttatttttgatggaacttaattgtctatatttcaaattcaa 475
Query: 971 tgatgtggttgtgtctctacagcaggcatactctttgtttcttggaccactaatatcaca 1030
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 476 tgatgtggttgtgtctctacagcaggcatactctttgtttcttggacaactaatatcaca 535
Query: 1031 tcaacagtacaaagtttatgcgtcactcagccgtctcggataccgtgtgtataggcatga 1090
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 536 tcaacagtacaaagtttatgcgtcactcagccgtctcggttaccgtgtgtataggcatga 595
Query: 1091 aacatcagacaaagagatacataatcccagtactagtaataatgttaacaaagtcaatat 1150
|||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aacatcagaccaagaaataaataatcccagtactagtaataatgttaacaaagtcaatat 655
Query: 1151 tggtagctcggaagcgagttgttcggttgggaatccaactatggtaaacattaaatt 1207
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 tggtagctcggaagcgagttgttcggttgggaatccaactatggtaaacattaaatt 712
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 411,410
Number of extensions: 7876
Number of successful extensions: 7876
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7876
Number of HSP's successfully gapped: 2
Length of query: 3499
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3481
Effective length of database: 8,109,745
Effective search space: 28230022345
Effective search space used: 28230022345
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)