BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17746 (UTR included)
(2449 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052A1D07 1507 0.0
BF01062B2H06 1205 0.0
>BF01052A1D07
Length = 824
Score = 1507 bits (760), Expect = 0.0
Identities = 808/824 (98%)
Strand = Plus / Plus
Query: 1458 ccccaacagacgaaggacgggctggtgaggaaggcccgtctggataaggacgctaagggt 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccccaacagacgaaggacgggctggtgaggaaggcccgtctggataaggacgctaagggt 60
Query: 1518 gtggtgatagaaagactagaagtctacaatagtatagaagtcctggcaccgaacatagaa 1577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtggtgatagaaagactagaagtctacaatagtatagaagtcctggcaccgaacatagaa 120
Query: 1578 ctagaagacgaggcttctataagaggttccagaagggtagaagaagaagatgggctgaaa 1637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctagaagacgaggcttctataagaggttccagaagggtagaagaagaagatgggctgaaa 180
Query: 1638 ggtttttcccccggcgacaaaacaatatgcctatctcctgggaaaatggccttagccttt 1697
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 181 ggtttttcccccggcgacaaaacgatatgcctctctcctgggaaaatggccttagccttt 240
Query: 1698 tgtatacttggcatcattttcctatgtgctattgctgtagctttcgcgtccttagtgcga 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtatacttggcatcattttcctatgtgctattgctgtagctttcgcgtccttagtgcga 300
Query: 1758 gcgagacggagaacacctcgagagccggtgaatacgtctctctctttctacaccggtagc 1817
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcgagacggagaacacctcgagagccggtgaatacgtctctctctttctacaccggtagc 360
Query: 1818 aagagtctcttctcttctagtggcagcagtagttccggtttaagtggcagcaagcttctt 1877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagagtctcttctcttctagtggcagcagtagttccggtttaagtggcagcaagcttctt 420
Query: 1878 ctaaccgatagtccatatttagaccaccattcgtcttccagtaacaattggccatatgct 1937
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 421 ctaactgatagtccatatttagaccaccattcgtcttccagtaataattggccatatgct 480
Query: 1938 cgggcattttaatgactagatatacgtactatcttatatatcggcttcaattaaattaag 1997
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 481 cgggcattttaatgactagatatacatactctcttatatatcggcttcaattaaattaag 540
Query: 1998 aatgatataaatataaataaactgctctctgtcgtataaaattgtaattgtcggattata 2057
|||| ||||||| ||||||||||||||||||||||||||||| ||||| ||| |||||||
Sbjct: 541 aatgctataaatttaaataaactgctctctgtcgtataaaatggtaatcgtccgattata 600
Query: 2058 ttgtgagatattcgaataaatagataataaagaatttatgcacattagaacacagataat 2117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 601 ttgtgagatattcgaataaatagataataaagaatttatgcacattagaacacagatagt 660
Query: 2118 aaatatgaaatacaagtgtgttgatgtttcgctaattcaatacgttttattaataatttt 2177
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 661 aaatatgaaatacaagtgtgttgatgtttcgctaattcaatacgttttattaacaatttt 720
Query: 2178 tgacacatgtcatattgaggaggtgcttctgtttcatagtaagtttgtcttaaattcaac 2237
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 721 tgacacatgtcatattgaggaggtgcttctgtgtcatagtaagtttatcttaaattcaac 780
Query: 2238 aatttatttgttgtatcaaaaacgtcacataagcacttcctcga 2281
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aatttatttgttgtatcaaaaacgtcacataagcacttcctcga 824
>BF01062B2H06
Length = 830
Score = 1205 bits (608), Expect = 0.0
Identities = 652/666 (97%), Gaps = 3/666 (0%)
Strand = Plus / Plus
Query: 489 ggggacgtcaatatgtggcgtgtgatcctgctgacggtactcctgtgtggagtacagagt 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 ggggacgtcaatatgtggcgtgtgatcctgctgacggtactcctgtgtggagtacagagt 224
Query: 549 catcctaataaggtccgcaatgtgacgacatcgtgtgacaaaggctcaatcactatcaat 608
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 catcctaataaggtccgcgatgtgacgacatcgtgtgacaaaggctcaatcactatcaat 284
Query: 609 atagacatggagaagccattcaagggtctagttttcagtaaggacttctcaagagaatgt 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atagacatggagaagccattcaagggtctagttttcagtaaggacttctcaagagaatgt 344
Query: 669 cggattttaggtcaaatgcagacgaatgtttcattgcatttgccttcaaacacgtgcgga 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cggattttaggtcaaatgcagacgaatgtttcattgcatttgccttcaaacacgtgcgga 404
Query: 729 gtaaggacatcaatacagaacaacacgacaaagagatacgatgaactaaatctgtactac 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gtaaggacatcaatacagaacaacacgacaaagagatacgatgaactaaatctgtactac 464
Query: 789 acggtggaggtagtagttcaaatggataagatgcttcaacagtcatcagaccaggagata 848
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 acggtggagttagtagttcaaatggataagatgcttcaacagtcatcagaccaggagata 524
Query: 849 attgttaggtgtaaattgcaacctcgtgcggtgcggataaacagctcagcgcttgaaggc 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 attgttaggtgtaaattgcaacctcgtgcggtgcggataaacagctcagcgcttgaaggc 584
Query: 909 gtcattaaatctagactgcgagaaattaccggccatgaagggaaacggatgagaactgga 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gtcattaaatctagactgcgagaaattaccggccatgaagggaaacggatgagaactgga 644
Query: 969 cggaatagaaagggttgggataggatggttgaggtggaacagcaagagctgttagaagca 1028
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 645 cggaatagaaagggttgggataggatggttgaagtggaacaggaagagctgttagaagca 704
Query: 1029 gctcgagcctggatgcagctggcgccagacacggtggaggtcggacaacccacggagctc 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gctcgagcctggatgcagctggcgccagacacggtggaggtcggacaacccacggagctc 764
Query: 1089 atgataca---gacatgtgatgtgggcgtcggtctccgtgtaacaaactgcatagcgcac 1145
|||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 765 atgatacactgtacactaccagtgggcgtcggtctccgtgtaacaaactgcatagcgcac 824
Query: 1146 gatggt 1151
||||||
Sbjct: 825 gatggt 830
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 280,232
Number of extensions: 6044
Number of successful extensions: 6044
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6043
Number of HSP's successfully gapped: 3
Length of query: 2449
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2432
Effective length of database: 8,119,229
Effective search space: 19745964928
Effective search space used: 19745964928
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)