BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17754 (UTR included)
(8494 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013A1E04 1481 0.0
>BF01013A1E04
Length = 797
Score = 1481 bits (747), Expect = 0.0
Identities = 756/759 (99%)
Strand = Plus / Plus
Query: 6964 tagcggggattcaggaacaacttaccaggttgccatctctgcagcaacccagaaaggtta 7023
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 39 tagcggggattcaggaacaacttaccaggttgccatctctgcagcaacccaggaaggtta 98
Query: 7024 ccttgataggttcagacggaaagaaatacatcatcatgttgaaacctaaagacgacctgc 7083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 ccttgataggttcagacggaaagaaatacatcatcatgttgaaacctaaagacgacctgc 158
Query: 7084 gaaaagatttccgtttgatggaattcaatggcgtcgttaataaattccttcaagacgcgc 7143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gaaaagatttccgtttgatggaattcaatggcgtcgttaataaattccttcaagacgcgc 218
Query: 7144 ctgaaactaggaagagacggctttatataaggacgtacagcgtcctgcctctcaacgagg 7203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ctgaaactaggaagagacggctttatataaggacgtacagcgtcctgcctctcaacgagg 278
Query: 7204 aatgtggtctgatagaatgggttcccaatctcgttggattacgaccgatcctgatacata 7263
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 279 aatgtggtctgatagaatgggttcccaatctggttggattacgaccgatcctgatacata 338
Query: 7264 tatataaacagaaaggcattcagaccagcaacagtgagcttcggaaaatgatgtgttcaa 7323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tatataaacagaaaggcattcagaccagcaacagtgagcttcggaaaatgatgtgttcaa 398
Query: 7324 gtagcgacagcgtggagaagaagcgtgatatatacgagaggttgttactaccgcgacatc 7383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gtagcgacagcgtggagaagaagcgtgatatatacgagaggttgttactaccgcgacatc 458
Query: 7384 cgcccgtcttccaggagtggttcaggaagaccttctcggacccatacggatggtatcagg 7443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 cgcccgtcttccaggagtggttcaggaagaccttctcggacccatacggatggtatcagg 518
Query: 7444 cgaggtcagcgtatattagaaccactgctgttatgtccatagtcggttatattttaggtc 7503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 cgaggtcagcgtatattagaaccactgctgttatgtccatagtcggttatattttaggtc 578
Query: 7504 taggcgatagacacggtgagaacatatcgttcgactccactaacggtgacacggttcacg 7563
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 579 taggcgatagacacggtgagaacatatcgttcgactccactaacggtgacacggtgcacg 638
Query: 7564 tggacttcaactgcctgttcaataggggtgagagcttcgaatggcccgagcgggtgccct 7623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tggacttcaactgcctgttcaataggggtgagagcttcgaatggcccgagcgggtgccct 698
Query: 7624 tcagactcacacacaacatgcaggcagccatggggcctctcaaacacgacggcatgtaca 7683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tcagactcacacacaacatgcaggcagccatggggcctctcaaacacgacggcatgtaca 758
Query: 7684 ggaaatgctgtgaggctgtaacgcgagtgctgcggtctc 7722
|||||||||||||||||||||||||||||||||||||||
Sbjct: 759 ggaaatgctgtgaggctgtaacgcgagtgctgcggtctc 797
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 151,558
Number of extensions: 18605
Number of successful extensions: 18605
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 18605
Number of HSP's successfully gapped: 1
Length of query: 8494
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 8476
Effective length of database: 8,109,745
Effective search space: 68738198620
Effective search space used: 68738198620
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)