BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17759 (UTR included)
(2467 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030B1E11 1239 0.0
>BF01030B1E11
Length = 713
Score = 1239 bits (625), Expect = 0.0
Identities = 665/679 (97%), Gaps = 12/679 (1%)
Strand = Plus / Plus
Query: 1767 atgctgataggtgaaaaccttccaaagcggcaaagaaaaaagtcccaaagggattcaata 1826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 atgctgataggtgaaaaccttccaaagcggcaaagaaaaaagtcccaaagggattcaata 96
Query: 1827 agttcggattcaatgctgagccccagaccgagaaattacagtgttagtgaggatgatgat 1886
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 97 agttcggattcaatgctgagccccagaccgagaaattacagtgtcagtgaggatgatgat 156
Query: 1887 aggaaaaggaagatcaaaatggcctcaggttctaaaaggactagaaatatgagttcaagt 1946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 aggaaaaggaagatcaaaatggcctcaggttctaaaaggactagaaatatgagttcaagt 216
Query: 1947 agtgcccaggacgcaacgtgactgttgttaatactaggttatcaaatttcacacatagta 2006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 agtgcccaggacgcaacgtgactgttgttaatactaggttatcaaatttcacacatagta 276
Query: 2007 aaggcatcacagtgtttattgcttacgagccatcttctagaacttgctaaaacaatttgt 2066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aaggcatcacagtgtttattgcttacgagccatcttctagaacttgctaaaacaatttgt 336
Query: 2067 ttagaccttacaacataaaatattcattttgacatattaatttcctctctccaacactgc 2126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttagaccttacaacataaaatattcattttgacatattaatttcctctctccaacactgc 396
Query: 2127 catagataaataaatttaaatatcacatgcttactctataatatgaagagttatctttat 2186
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 397 catagataaataaatttaaatatcacatgcttactctataatatgaagag--atctttat 454
Query: 2187 atattactaacgagcaacttgaaagttaagtcgatcagtgcatacatcataagtcaactg 2246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 atattactaacgagcaacttgaaagttaagtcgatcagtgcatacatcataagtcaactg 514
Query: 2247 gctaagatagtgatgtttgtattttattgtatg----------ttatcatgacagataaa 2296
||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 515 gctaagatagtgatgtttgtattttatagtatgtacattgatattatcatgacagataaa 574
Query: 2297 tatattcaataatatttaacagataagccattttgatagccaagtgctttacatgagaat 2356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tatattcaataatatttaacagataagccattttgatagccaagtgctttacatgagaat 634
Query: 2357 gccgtcaagcccaatacaatgttattataagtgtaaataatgaagtccgtgttaaattgt 2416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 gccgtcaagcccaatacaatgttattataagtgtaaataatgaagtccgtgttaaattgt 694
Query: 2417 tttttggatttgaatctgt 2435
|||||||||||||||||||
Sbjct: 695 tttttggatttgaatctgt 713
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 339,992
Number of extensions: 7977
Number of successful extensions: 7977
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7976
Number of HSP's successfully gapped: 2
Length of query: 2467
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2450
Effective length of database: 8,119,229
Effective search space: 19892111050
Effective search space used: 19892111050
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)