BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17760 (UTR included)
(2110 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_113_C1 1933 0.0
BF01021B2D03 617 e-176
>BF14_113_C1
Length = 1602
Score = 1933 bits (975), Expect = 0.0
Identities = 1081/1111 (97%), Gaps = 4/1111 (0%)
Strand = Plus / Plus
Query: 1003 tatctccctggtgtgctgttttttccaaagacgatctgaagcgtctagagtacgcagaag 1062
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3 tatctccctggtgtgctgttttttccaa-gacgatctgaagcgtctagagtacgcagaag 61
Query: 1063 acttggagacctattacaaatacggctacggttcatacatgaatcaacagataggatgta 1122
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 acttggagacttattacaaatacggctacggttcatacatgaatcaacagataggatgta 121
Query: 1123 ccggcgtcaaggatatgatggacttctttaaaatacacgttgaacatgaaactccgcaac 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 122 ccggcgtcaaggatatgatggacttctttaaaatacacgttgaacatgaaactccacaac 181
Query: 1183 agccgcgcgcgaccgttcacttcactgaggcggccatgttgtttctgtcgttgacgtctt 1242
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agccgcgcgcgaccattcacttcactgaggcggccatgttgtttctgtcgttgacgtctt 241
Query: 1243 ttggcgcgagacgtgacgccgcgccgctcacaggcgacaactatcacacgccgacagcca 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttggcgcgagacgtgacgccgcgccgctcacaggcgacaactatcacacgccgacagcca 301
Query: 1303 ccgctcgccactggacatcctctagcatttcaccgtacaatgcgaatcttgctgctatac 1362
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 302 ccgctcgccactggacatcctctagcatttcaccgtacaatgcaaatcttgctgctatac 361
Query: 1363 tgtacaaatgcacaccaaatagcaattttcaaattaacgacaaatatcaggtgctattct 1422
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 362 tgtacaaatgcacaccaaatagcaatttccaaataaacgacaaatatcaggtgctattct 421
Query: 1423 tggagaacgagagacctttatacctcgagggatgtcgagttggtctgtgcgaatggaacc 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tggagaacgagagacctttatacctcgagggatgtcgagttggtctgtgcgaatggaacc 481
Query: 1483 ttgtcaagaatcgtttcggtttgatcgctgacaattgcaatttaaatttctgcaactcag 1542
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttgtcaagaatcgcttcggtttgatcgctgacaattgcaatttaaatttctgcaactcag 541
Query: 1543 ccactaaagccaacagcatcggcttaagtttagctgtatttgtgttcataaccaaatata 1602
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ccactaaagcaaacagcatcggcttaagtttagctgtatttgtgttcataaccaaatata 601
Query: 1603 tattctaggattttatctaacatttgctattcttcaataattaaaattttactaattaaa 1662
||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||
Sbjct: 602 tattctaggattttatcgaaaatatgctattcttcaataattaaaattttactaattaaa 661
Query: 1663 agacaagtttgatgatattagtgatactactagcaacactgaaatatgcatgtctatgag 1722
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agacaagtttgatgatgttaatgatactactagcaacactgaaatatgcatgtctatgag 721
Query: 1723 tctggcaaatataggactctgaatgtgattcaagtccttacaaaatatcttaattatctt 1782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tctggcaaatataggactctgaatgtgattcaagtccttacaaaatatcttaattatctt 781
Query: 1783 cgtagtagtatagcttaagtatgtccttcggttacttatgactagtaagcgacaatttta 1842
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 cgtagtagtatagcttaggtatgtccttcggttacttatgactagtaagcgacaatttta 841
Query: 1843 gcggttttttgtatattattgtttaacc-ttttttcagatccgatttaaattaatcatga 1901
|||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||
Sbjct: 842 gcggttttttgtatattattgtttaacctttttttcagatctgatttaaatgaatcatga 901
Query: 1902 caatacataaattatttttgaaagcttcccaaatgacattctaaatatgtatacatatat 1961
||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||
Sbjct: 902 caatacataaattatttttaaaagcttctccaatgacattctaaatatgtatacatatat 961
Query: 1962 gtattatgaaatttaattctcaa-ttattgttattctttctaactttgattcagtgcggg 2020
||||||||||||||||||| ||| | ||| |||||||||||||||||||||||| || ||
Sbjct: 962 gtattatgaaatttaattcccaactaattattattctttctaactttgattcagcgccgg 1021
Query: 2021 ttttataatgaaattgtaatagcaaaccgc-ttttttggcaatcaattctattttgcttt 2079
||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||
Sbjct: 1022 ttttataatgaaattgtaatatcaaaccgctttttttggcaatcaattctatttttcttt 1081
Query: 2080 ggaaattttattaattcaaaatttatgtacc 2110
|||||||||||||||||||||||||||||||
Sbjct: 1082 ggaaattttattaattcaaaatttatgtacc 1112
>BF01021B2D03
Length = 790
Score = 617 bits (311), Expect = e-176
Identities = 317/319 (99%)
Strand = Plus / Plus
Query: 495 atccgtatgtgcacatcggacgtcaatctcctagagcgatgggaatggaattctcgtcag 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 atccgtatgtgcacatcggacgtcaatctcctagagcgatgggaatggaattctcgtcag 531
Query: 555 aacgcgacattcgctggagaacttaccagcgatggatatatatccactcaggagctggca 614
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 aacgtgacattcgctggagaacttaccagcgatggatatatatccactcaggagctggca 591
Query: 615 caagcttggaaacaacggttccctggactactgacagataatagacatgattatttgttc 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 caagcttggaaacaacggttccctggactactgacagataatagacatgattatttgttc 651
Query: 675 aaatttgtgaacgaccagcggtcggaaacaacgttccgcgctttcaccgaaggtctgttc 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 aaatttgtgaacgaccagcggtcggaaacaacgttccgcgctttcaccgaaggtctgttc 711
Query: 735 aggtctcaggcagacaattacgatataccgaaggaaagcgatgagaagttactgaggcct 794
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 aggtctcaagcagacaattacgatataccgaaggaaagcgatgagaagttactgaggcct 771
Query: 795 tataaattctgcccatcat 813
|||||||||||||||||||
Sbjct: 772 tataaattctgcccatcat 790
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 255,306
Number of extensions: 4775
Number of successful extensions: 4775
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4771
Number of HSP's successfully gapped: 2
Length of query: 2110
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2093
Effective length of database: 8,119,229
Effective search space: 16993546297
Effective search space used: 16993546297
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)