BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17769 (UTR included)
(1699 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2005_C1 1798 0.0
>BF14_2005_C1
Length = 1214
Score = 1798 bits (907), Expect = 0.0
Identities = 931/939 (99%)
Strand = Plus / Plus
Query: 237 tcttcgaactgtttactagaagtataaacgggcataatgtagaacggttatgtgatattt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttcgaactgtttactagaagtataaacgggcataatgtagaacggttatgtgatattt 60
Query: 297 ataaattaaaggaaaaagtgatactttaaaatgttatttcgaaatataaggaaggttgta 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataaattaaaggaaaaagtgatactttaaaatgttatttcgaaatataaggaaggttgta 120
Query: 357 aaatattcgttttatagtggcgttactataggaggtactgttgtcgcttttaagtatcgc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatattcgttttatagtggcgttactataggaggtactgttgtcgcttttaagtatcgc 180
Query: 417 gatggtgattatgattccttagcgatagtaaggctcagtagagctgcattaacagcagta 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatggtgattatgattccttagcgatagtaaggctcagtagagctgcattaacagcagta 240
Query: 477 aacattgggagaacttaccaatctatgctatacagcagagaatgggacaaagcttcaaaa 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacattgggagaacttaccaatctatgctatacagcagagaatgggacaaagcttcaaaa 300
Query: 537 gaatacattcaagcgaaaagcgatgctcatacaattggggcggcgaaactgcttgaatta 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaatacattcaagcgaaaagcgatgctcatacaattggggcggcgaaactgcttgaatta 360
Query: 597 tgcaaagctaataaaggtgtgtacattaaagttgggcagcatgtcggagcgctcgactac 656
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 361 tgcaaagctaataaaggtgtgtacattaaagttgggcagcatgtaggagcgctcgactac 420
Query: 657 ttgcttcccaacgagtatgttcaaacgatgcgtgttctgcataaagacgcgccgagaaat 716
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 421 ttgcttcccaacgagtatgttcaaacgatgcgtgttctgcataaagacgcaccgagaaat 480
Query: 717 tccttggaagagctttacgaggttattagagaagatttaaaaaaagaccctgaagattta 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tccttggaagagctttacgaggttattagagaagatttaaaaaaagaccctgaagattta 540
Query: 777 tttgaagaatttgattcagagccactaggtaccgcgtctctggcacaggttcataaagca 836
||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 541 tttgaagaatttgatccagagccactaggtacggcgtctctagcacaggttcataaagca 600
Query: 837 aaacttaaagatggttccgaagtcgcagtcaaagtccaacatcactttgtaagaaaaaac 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaacttaaagatggttccgaagtcgcagtcaaagtccaacatcactttgtaagaaaaaac 660
Query: 897 ataaagattgacctccaatggatggaatttattatcaatgtgatgtccaaagtcttccca 956
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ataaagattgacctgcaatggatggaatttattatcaatgtgatgtccaaagtcttccca 720
Query: 957 gattttcaaatgcaatggctggtggacgagaccaagaagaatatcacaaaggaattagat 1016
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gatttccaaatgcaatggctggtggacgagaccaagaagaatatcacaaaggaattagat 780
Query: 1017 ttcttacaagaaggcaagaatgctgagaaggtttcggaattgtttagaaattatacatgg 1076
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttcttacaagaaggcaagaacgctgagaaggtttcggaattgtttagaaattatacatgg 840
Query: 1077 ttgaaggtgcccaaaatatactgggagtacagctccgagagggtcctggttatggagtat 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ttgaaggtgcccaaaatatactgggagtacagctccgagagggtcctggttatggagtat 900
Query: 1137 gtgacgggcgggcaggttaatgatgtgaaatatttagaa 1175
|||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gtgacgggcgggcaggttaatgatgtgaaatatttagaa 939
Score = 345 bits (174), Expect = 1e-94
Identities = 174/174 (100%)
Strand = Plus / Plus
Query: 1393 aaacacaatatcagtaaacccgatttatgcacaaagttaggcgatctatactcccatatg 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 aaacacaatatcagtaaacccgatttatgcacaaagttaggcgatctatactcccatatg 999
Query: 1453 atatttgtcactggatttgtgcatagcgatccacatccaggcaatattctggtgcataag 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 atatttgtcactggatttgtgcatagcgatccacatccaggcaatattctggtgcataag 1059
Query: 1513 gaccctcaagataaggacgtgtcggtttacctcttggatcatggtttgtatgca 1566
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1060 gaccctcaagataaggacgtgtcggtttacctcttggatcatggtttgtatgca 1113
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 217,236
Number of extensions: 4690
Number of successful extensions: 4690
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4690
Number of HSP's successfully gapped: 2
Length of query: 1699
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1682
Effective length of database: 8,119,229
Effective search space: 13656543178
Effective search space used: 13656543178
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)