BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17777 (UTR included)
(920 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1279_C1 987 0.0
>BF14_1279_C1
Length = 1059
Score = 987 bits (498), Expect = 0.0
Identities = 504/506 (99%)
Strand = Plus / Plus
Query: 29 tctactgtctccaaccccccaccatcgagcacgctcgtcactccgctctccccgagcaag 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tctactgtctccaaccccccaccatcgagcacgctcgtcactccgctctccccgagcaag 613
Query: 89 ccaccttcgacctggacgctactgttcagtacaactgtcacactggttacgtaaccaacg 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ccaccttcgacctggacgctactgttcagtacaactgtcacactggttacgtaaccaacg 673
Query: 149 gcttccctcgggccaaatgtctggcgatcgacggccaggcctcctggtacggacctgata 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gcttccctcgggccaaatgtctggcgatcgacggccaggcctcctggtacggacctgata 733
Query: 209 tcacttgcgaacctcgttcctgcggcgagcccggggacgttcctcatggctgggtgactg 268
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tcacctgcgaacctcgttcctgcggcgagcccggggacgttcctcatggctgggtgactg 793
Query: 269 ccgattgtcacaccttcggctgcagagccgtggtgcagtgcggacaagggttcgagctgg 328
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 ccgactgtcacaccttcggctgcagagccgtggtgcagtgcggacaagggttcgagctgg 853
Query: 329 tggggaaggccgagaggtactgtcaggccgacggcgcctgggctcccaaggagctgccca 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 tggggaaggccgagaggtactgtcaggccgacggcgcctgggctcccaaggagctgccca 913
Query: 389 cctgtgtccagggagagaaggggacaaaatgaattattctgtagtattattaataaaata 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 cctgtgtccagggagagaaggggacaaaatgaattattctgtagtattattaataaaata 973
Query: 449 tagaattcttgatctatgatatagaatctttctgaatttcaaaattaaatggccatggta 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 tagaattcttgatctatgatatagaatctttctgaatttcaaaattaaatggccatggta 1033
Query: 509 acgaatacaatgactactttaactgc 534
||||||||||||||||||||||||||
Sbjct: 1034 acgaatacaatgactactttaactgc 1059
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 106,196
Number of extensions: 2247
Number of successful extensions: 2247
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2247
Number of HSP's successfully gapped: 1
Length of query: 920
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 903
Effective length of database: 8,119,229
Effective search space: 7331663787
Effective search space used: 7331663787
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)