BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17779 (UTR included)
(3115 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3158_C1 1610 0.0
BF01021A1F04 1068 0.0
BF01044B2D04 438 e-122
>BF14_3158_C1
Length = 837
Score = 1610 bits (812), Expect = 0.0
Identities = 831/836 (99%), Gaps = 1/836 (0%)
Strand = Plus / Plus
Query: 1240 gcttcacgtgctcgggcctggacgggtccgtggacgcgctgctgcgggcggccggcgcgc 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gcttcacgtgctcgggcctggacgggtccgtggacgcgctgctgcgggcggccggcgcgc 61
Query: 1300 tccgctacatacacgagaacttcaccaacgctccctccgtggacctcgccgc-cgacacg 1358
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 62 tccgctacatacacgagaacttcaccaacgctccctccgtggacctcgccgcncgacacc 121
Query: 1359 ctgctggtgctgggcgcgctcatgacggcgcaggcccgcgagtgtctgttcgagaagctg 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctgctggtgctgggcgcgctcatgacggcgcaggcccgcgagtgtctgttcgagaagctg 181
Query: 1419 cagctgcaggccagcgagtgtcgcgaccagctcggagaccagcttagcttggacctggcg 1478
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 182 cagctgcaggccagcgagtgtcgcgaccagctcggagaccagcttagcctggacctggcg 241
Query: 1479 caggaggccgcacgcctggcagacacctaccgacagctgtacgagaagatgcagacggag 1538
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 caggaggccgcgcgcctggcagacacctaccgacagctgtacgagaagatgcagacggag 301
Query: 1539 ggagtcatcaactacgtgccgtactcctgggtgtcgctggtgcacgtcaaggcggagttc 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggagtcatcaactacgtgccgtactcctgggtgtcgctggtgcacgtcaaggcggagttc 361
Query: 1599 tatagagcggtgtctcacgagtactgcgccgcggggctcctggcacccgaggggccgccc 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tatagagcggtgtctcacgagtactgcgccgcggggctcctggcacccgaggggccgccc 421
Query: 1659 ggcgacagactgcgggacctctaccagccggacggacacggcgagcaggcctcgtgcgag 1718
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 422 ggcgacagactgcgggacctctaccagccggacggacacggcgggcaggcctcgtgcgag 481
Query: 1719 agctctctgccggcgctgggtcgggctcacctcgcggaggccctcgcggcctacgaggag 1778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 agctctctgccggcgctgggtcgggctcacctcgcggaggccctcgcggcctacgaggag 541
Query: 1779 gcgctcaggctgcagaggatgtgtagggagctccggaacaagcagtctctgtcccgcctg 1838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gcgctcaggctgcagaggatgtgtagggagctccggaacaagcagtctctgtcccgcctg 601
Query: 1839 atgagcgtgagtcgggagcgagccgcggggctggtggcgccacccgctgacgacttcgac 1898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 atgagcgtgagtcgggagcgagccgcggggctggtggcgccacccgctgacgacttcgac 661
Query: 1899 gacctcatcgacgctccgcacatagccccatcgtccaagttccagctggcgctgactccg 1958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gacctcatcgacgctccgcacatagccccatcgtccaagttccagctggcgctgactccg 721
Query: 1959 cccgacttctcccagcaccgggtggaggacctgttccggtccctgggacccatcgccgtg 2018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 cccgacttctcccagcaccgggtggaggacctgttccggtccctgggacccatcgccgtg 781
Query: 2019 ttctccgccaagcgccactggagcgccccgcgtctagtgacgctccaccggcacgc 2074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ttctccgccaagcgccactggagcgccccgcgtctagtgacgctccaccggcacgc 837
>BF01021A1F04
Length = 711
Score = 1068 bits (539), Expect = 0.0
Identities = 548/551 (99%)
Strand = Plus / Plus
Query: 335 caggaccctcggacacggagcgtgtggtgtagagtcgcagacgactgaagaaaaatcatt 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 caggaccctcggacacggagcgtgtggtgtagagtcgcagacgactgaagaaaaatcatt 220
Query: 395 tggaaggaggaggggatgtgattgaaattaaatgagtgaataaataacaaaaaatagtgg 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 tggaaggaggaggggatgtgattgaaattaaatgagtgaataaataacaaaaaatagtgg 280
Query: 455 aacgtgtcactagagaagggggaggtggtgtgtatgatgattgataatgggtgatcaggg 514
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aacgtgtcactagagaagagggaggtggtgtgtatgatgattgataatgggtgatcaggg 340
Query: 515 agtgtacaagacgtgcgtcaacatcaacgaggatgagggggaggatgaagtggacctggc 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 agtgtacaagacgtgcgtcaacatcaacgaggatgagggggaggatgaagtggacctggc 400
Query: 575 gctcaccaggaagaatcctttcgtgaggggctccgacccccgcgtggcgacctgccgcgg 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gctcaccaggaagaatcctttcgtgaggggctccgacccccgcgtggcgacctgccgcgg 460
Query: 635 ccgtctccagacccgcaggtgtcaactcaaccaggagatcaacaaggaactgcggctgag 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ccgtctccagacccgcaggtgtcaactcaaccaggagatcaacaaggaactgcggctgag 520
Query: 695 ggcgggcgcggagaacctgttcaaggctaccaccaacaggaagctgagggagacggtggc 754
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 521 ggcgggcgcggagaacctgttcaaggctaccaccaacagaaagctgagggagacggtggc 580
Query: 755 cttggagctgagcttcgtcaactccaacctccagctgctgaaggaacagctggccgagct 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 cttggagctgagcttcgtcaactccaacctccagctgctgaaggaacagctggccgagct 640
Query: 815 caactcctcggtggagctgtaccagaacgacagcaaagaatgtgtgatgcccatgatccc 874
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 641 caactcctcggtggagctgtaccagaacgacagcaaagaatgcgtgatgcccatgatccc 700
Query: 875 gctgggcctga 885
|||||||||||
Sbjct: 701 gctgggcctga 711
>BF01044B2D04
Length = 657
Score = 438 bits (221), Expect = e-122
Identities = 225/227 (99%)
Strand = Plus / Plus
Query: 1604 agcggtgtctcacgagtactgcgccgcggggctcctggcacccgaggggccgcccggcga 1663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 agcggtgtctcacgagtactgcgccgcggggctcctggcacccgaggggccgcccggcga 490
Query: 1664 cagactgcgggacctctaccagccggacggacacggcgagcaggcctcgtgcgagagctc 1723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cagactgcgggacctctaccagccggacggacacggcgagcaggcctcgtgcgagagctc 550
Query: 1724 tctgccggcgctgggtcgggctcacctcgcggaggccctcgcggcctacgaggaggcgct 1783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tctgccggcgctgggtcgggctcacctcgcggaggccctcgcggcctacgaggaggcgct 610
Query: 1784 caggctgcagaggatgtgtagggagctccggaacaagcagtctctgt 1830
||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 611 caggctgcagannatgtgtagggagctccggaacaagcagtctctgt 657
Score = 422 bits (213), Expect = e-117
Identities = 219/221 (99%)
Strand = Plus / Plus
Query: 1385 ggcgcaggcccgcgagtgtctgttcgagaagctgcagctgcaggccagcgagtgtcgcga 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ggcgcaggcccgcgagtgtctgttcgagaagctgcagctgcaggccagcgagtgtcgcga 137
Query: 1445 ccagctcggagaccagcttagcttggacctggcgcaggaggccgcacgcctggcagacac 1504
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 138 ccagctcggagaccagcttagcctggacctggcgcaggaggccgcgcgcctggcagacac 197
Query: 1505 ctaccgacagctgtacgagaagatgcagacggagggagtcatcaactacgtgccgtactc 1564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ctaccgacagctgtacgagaagatgcagacggagggagtcatcaactacgtgccgtactc 257
Query: 1565 ctgggtgtcgctggtgcacgtcaaggcggagttctatagag 1605
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctgggtgtcgctggtgcacgtcaaggcggagttctatagag 298
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 240,020
Number of extensions: 4417
Number of successful extensions: 4417
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4416
Number of HSP's successfully gapped: 4
Length of query: 3115
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3097
Effective length of database: 8,109,745
Effective search space: 25115880265
Effective search space used: 25115880265
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)