BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17786 (UTR included)
(6949 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B1B12 1489 0.0
BF14_1405_C1 1116 0.0
BF01034A2D03 817 0.0
>BF01037B1B12
Length = 769
Score = 1489 bits (751), Expect = 0.0
Identities = 764/769 (99%)
Strand = Plus / Plus
Query: 3281 agtattaaattcgattctagatgaattagatgacttagaggataagcctaaacaaaataa 3340
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 agtattaaattcgattctagatgaattanntgacttagaggataagcctaaacaaaataa 60
Query: 3341 gtatttcgcaaccgacgtgccgtctaaggaccacagaaagaaatttgttattgaatcaga 3400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtatttcgcaaccgacgtgccgtctaaggaccacagaaagaaatttgttattgaatcaga 120
Query: 3401 tgatgaagctattgagaattcaccaaaaaagaccaagaaacttaagaaaaagaaggcaga 3460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgatgaagctattgagaattcaccaaaaaagaccaagaaacttaagaaaaagaaggcaga 180
Query: 3461 gcaacgtgctttacatatatcagatgatgaagaagaagataatgtagaaagtgacttaga 3520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcaacgtgctttacatatatcagatgatgaagaagaagataatgtagaaagtgacttaga 240
Query: 3521 agagcaagatgacaggattgtggagtacgattcagaggagaatgagatcgtagtacagca 3580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agagcaagatgacaggattgtggagtacgattcagaggagaatgagatcgtagtacagca 300
Query: 3581 gccaaaaaccaaacaatccaagaaaggaataacagatttctttgagaatgaggctgaatt 3640
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gccaaaaaccaaacaatcaaagaaaggaataacagatttctttgagaatgaggctgaatt 360
Query: 3641 gacatctgaagatgaatgggtgggttctggtgatgaagatgaacggggcctggaccggat 3700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gacatctgaagatgaatgggtgggttctggtgatgaagatgaacggggcctggaccggat 420
Query: 3701 ggagagggaagaaggagacaatgacaacttccatcaaggacagctgcagagagagctggg 3760
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 421 ggagagggaagaaggagacaatgacagcttccatcaaggacagctgcagagagagctggg 480
Query: 3761 acagatacatatgcgtgaagtcttagaccaggacaaacgtgaagtgaggctcatacagga 3820
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 481 acagatacatatgcgtgaagtcttagaccaggacaaacgtgaagtgaggctcattcagga 540
Query: 3821 actgctgttcgaagacggagatttgggtgatggacaccgacagagaaagtttcgctggca 3880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 actgctgttcgaagacggagatttgggtgatggacaccgacagagaaagtttcgctggca 600
Query: 3881 taatgcagatggtgaagaagaaaccggaacatatcctgaagaatttacagatacacagga 3940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taatgcagatggtgaagaagaaaccggaacatatcctgaagaatttacagatacacagga 660
Query: 3941 agatgaatttgaatccgaagaacagtggagaaaggaaagacatgaaagagaaatgtttat 4000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agatgaatttgaatccgaagaacagtggagaaaggaaagacatgaaagagaaatgtttat 720
Query: 4001 aaggcaaatgcgtgaaaaagatgaagagccaaacaagagtataaccaga 4049
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aaggcaaatgcgtgaaaaagatgaagagccaaacaagagtataaccaga 769
>BF14_1405_C1
Length = 779
Score = 1116 bits (563), Expect = 0.0
Identities = 590/599 (98%)
Strand = Plus / Plus
Query: 4434 gataagctgtttccctacgcagaggaaaatgtaaaacagttcctagaagcacagtgggag 4493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gataagctgtttccctacgcagaggaaaatgtaaaacagttcctagaagcacagtgggag 240
Query: 4494 aatgatgatgtgaaggaatcggtcacggcgctgaggaaactggccattgaggataaggaa 4553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatgatgatgtgaaggaatcggtcacggcgctgaggaaactggccattgaggataaggaa 300
Query: 4554 aaaaacgttgagggactcgttgctatcccaggcgaggatgcctctaaggaagatcaaatt 4613
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 301 aaaaacgttgagggactcgttgctatcccaggagaggatgcctctaaggaagatcaaatt 360
Query: 4614 gagggtttggtcaacaatgtcaaatggcagatgtccgctgatcgcaaagttggggcccta 4673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagggtttggtcaacaatgtcaaatggcagatgtccgctgatcgcaaagttggggcccta 420
Query: 4674 aaacagttacaggggctcatttggaagcagggctatgacaaaggagaccttaagggacat 4733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaacagttacaggggctcatttggaagcagggctatgacaaaggagaccttaagggacat 480
Query: 4734 gtcttcgatgatgtctctacagcactagaacagtggcactccattgaaggtcaaaaagtg 4793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtcttcgatgatgtctctacagcactagaacagtggcactccattgaaggtcaaaaagtg 540
Query: 4794 tacatctattcatcaggctcggttcaagctcagaaacttctctttggccagtcactagcc 4853
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tacatctattcatcaggctcggttcaagctcagaaacttctctttggccagtcactagct 600
Query: 4854 ggtgacctcctcaaatatatagatggtcactttgacactgcggtcggagggaaacaagaa 4913
||||||||||||||||||||||||||||| |||||||| || ||||| || |||||||||
Sbjct: 601 ggtgacctcctcaaatatatagatggtcattttgacaccgcagtcggtggaaaacaagaa 660
Query: 4914 gagtctagctacaaggctatagtggagaaaataggctgcaaagctgaagaagtattgttt 4973
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 661 gagtctagctacaaggctatagtggaaaaaataggctgcaatgctgaagaagtattgttt 720
Query: 4974 gtgactgatattgttaaagaagctgaagcagcatcgaaagcgggtcttcatgtggcgct 5032
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtgactgatattgttaaagaagctgaagcagcatcgaaagcgggtcttcatgtggcgct 779
>BF01034A2D03
Length = 884
Score = 817 bits (412), Expect = 0.0
Identities = 421/424 (99%)
Strand = Plus / Plus
Query: 6033 gtgttagaggagacggtcactgaaagcgatgttaaaatagaaatcacaccagaagaatcc 6092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gtgttagaggagacggtcactgaaagcgatgttaaaatagaaatcacaccagaagaatcc 68
Query: 6093 gcagacaagagtgaagcagaagaaaatataggagataaaaaagataaaaatgataaaaca 6152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gcagacaagagtgaagcagaagaaaatataggagataaaaaagataaaaatgataaaaca 128
Query: 6153 gaagaaaaaaactcggagccatcaaaagaaacagacaaaacggtcaaagacaaaccgaca 6212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gaagaaaaaaactcggagccatcaaaagaaacagacaaaacggtcaaagacaaaccgaca 188
Query: 6213 gaagatgcacaggttaacggaaaaacgaacggtgatctaatagagaacggagattcaaac 6272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gaagatgcacaggttaacggaaaaacgaacggtgatctaatagagaacggagattcaaac 248
Query: 6273 aaaatggaggaattaagcgcgagattgacggagaacggtgacgatgtgaggtcgaatggt 6332
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aaaagtgaggaattaagcgcgagattgacggagaacggtgacgatgtgaggtcgaatggt 308
Query: 6333 gacacgaagaacggcgacggagagaaggtggaaccggaagtatcagacattaaggttaag 6392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gacacgaagaacggcgacggagagaaggtggaaccggaagtatcagacattaaggttaag 368
Query: 6393 acagtatcaacagaggagccgagaaccgagctcatagaacaagccactgaggcataaaac 6452
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 369 acagtatcaacagaggagccgagaaccgaactcatagaacaagccactgaggcataaaac 428
Query: 6453 tatg 6456
||||
Sbjct: 429 tatg 432
Score = 551 bits (278), Expect = e-156
Identities = 278/278 (100%)
Strand = Plus / Plus
Query: 6672 gttcccggcggctgttcctcgagctcactccacttgcattaaaccggtgactatcttgta 6731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gttcccggcggctgttcctcgagctcactccacttgcattaaaccggtgactatcttgta 491
Query: 6732 cagtgccgaccacagcaataaactacgtgttaattaatattccgtatattttctacttgt 6791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cagtgccgaccacagcaataaactacgtgttaattaatattccgtatattttctacttgt 551
Query: 6792 tgacaagcgacgtataagacgtcttaactctcgtgtgttgccatacgtgctatccacata 6851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tgacaagcgacgtataagacgtcttaactctcgtgtgttgccatacgtgctatccacata 611
Query: 6852 acccattgagcttaaatgttttatatgtcgtgtgttttattattattttttatctgccgt 6911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 acccattgagcttaaatgttttatatgtcgtgtgttttattattattttttatctgccgt 671
Query: 6912 actgtatgagtggaatttatattggagtaattttaatc 6949
||||||||||||||||||||||||||||||||||||||
Sbjct: 672 actgtatgagtggaatttatattggagtaattttaatc 709
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 137,282
Number of extensions: 16094
Number of successful extensions: 16094
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 16092
Number of HSP's successfully gapped: 4
Length of query: 6949
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6931
Effective length of database: 8,109,745
Effective search space: 56208642595
Effective search space used: 56208642595
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)