BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17810 (UTR included)
(4141 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039A1H03 1084 0.0
BF01052B2B09 603 e-172
>BF01039A1H03
Length = 695
Score = 1084 bits (547), Expect = 0.0
Identities = 565/571 (98%)
Strand = Plus / Plus
Query: 1059 ggtttacagggagatactgcttttagtcctttaaatcaaaactttgaaaagatcttacgt 1118
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 125 ggtttacaaggagatactgcttttagtcctttaaatcaaaactttgaaaagattttacgt 184
Query: 1119 atgtgtgaagcatcacgaatacagagtatcagatatttagacagtgtactatcatactat 1178
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 185 atgtgtgaagcatcacgaatacagagcatcagatatttagacagtgtactatcatactat 244
Query: 1179 gagactacacttggtagaaaagatgcaagaaagataaaagttcctgttagggaagcattt 1238
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gagactacgcttggtagaaaagatgcaagaaagataaaagttcctgttagggaagcattt 304
Query: 1239 gttcatctcacagaagatattaatgatatgaatcataattggaacgccggtgatacagtt 1298
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 305 gttcatctcacagaagatattaatgatatgaatcataattggaacgccggtgataccgtt 364
Query: 1299 ataagccaatatgaattagcaatgcaaatacattttgatctctgctacaattactttttt 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ataagccaatatgaattagcaatgcaaatacattttgatctctgctacaattactttttt 424
Query: 1359 tacggccaacacgatcttgcgaaacagcacattttaggttgcagagaaaattctaactta 1418
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 425 tacggccaacacgatcttgcgaaacagcacattttaggttgtagagaaaattctaactta 484
Query: 1419 cttgagaaagaggttgcaagttacggctatgggccacataagacggtaccatggggtgaa 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cttgagaaagaggttgcaagttacggctatgggccacataagacggtaccatggggtgaa 544
Query: 1479 ttttattacgctagtatgaccaaggacgacattttgggttatataagagctttgaactta 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttttattacgctagtatgaccaaggacgacattttgggttatataagagctttgaactta 604
Query: 1539 ggttatgaggtattgaacgaagagccttcattgctacaaaaactccaggaatctatagca 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ggttatgaggtattgaacgaagagccttcattgctacaaaaactccaggaatctatagca 664
Query: 1599 aaccattatactggtatcataggtatattgc 1629
|||||||||||||||||||||||||||||||
Sbjct: 665 aaccattatactggtatcataggtatattgc 695
Score = 167 bits (84), Expect = 2e-40
Identities = 87/88 (98%)
Strand = Plus / Plus
Query: 900 accaactttgccattccccctcaggatgtgccggtggaaatgtttcacaaaccgcaagcc 959
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 31 accaactttgccattccccctcaggatgtgccagtggaaatgtttcacaaaccgcaagcc 90
Query: 960 cagtttgctctcacactatatcacagat 987
||||||||||||||||||||||||||||
Sbjct: 91 cagtttgctctcacactatatcacagat 118
>BF01052B2B09
Length = 364
Score = 603 bits (304), Expect = e-172
Identities = 323/328 (98%), Gaps = 1/328 (0%)
Strand = Plus / Plus
Query: 3620 caccaaccaatatgtcgtgtgattgaataatattgaaacgtctttagtattgatccactg 3679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 caccaaccaatatgtcgtgtgattgaataatattgaaacgtctttagtattgatccactg 77
Query: 3680 attacaataagattgtgcacaatcgactcgaattaataatatatatgtatgtattatttg 3739
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 78 attacaataagattgtgcacaatccactcgaattaataatatatatgtatgtattatttg 137
Query: 3740 aaatccgtttaatcacactctgaaactgttatcattgttatagtctagattttcattgtt 3799
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 aaatcccttta-tcacactctgaaactgttatcattgttatagtctagattttcattgtt 196
Query: 3800 ttatagattaagtcagagttgcctttattttctaccaaattgattggtctacaacagtcc 3859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ttatagattaagtcagagttgcctttattttctaccaaattgattggtctacaacagtcc 256
Query: 3860 aagaaatttataccttaatttccttcgattaaaataacaaggttgcttttagaaggaatt 3919
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 257 aagaaatttataccttaatttccttcgattaaaataacaatgttgcttttagaaggaatt 316
Query: 3920 gtaacaaataaaaacattgacataaaaa 3947
|||| |||||||||||||||||||||||
Sbjct: 317 gtaaaaaataaaaacattgacataaaaa 344
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 443,791
Number of extensions: 8728
Number of successful extensions: 8728
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8727
Number of HSP's successfully gapped: 3
Length of query: 4141
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4123
Effective length of database: 8,109,745
Effective search space: 33436478635
Effective search space used: 33436478635
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)