BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17811 (UTR included)
(731 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2906_C1 991 0.0
>BF14_2906_C1
Length = 1238
Score = 991 bits (500), Expect = 0.0
Identities = 506/508 (99%)
Strand = Plus / Plus
Query: 1 actatcgagttgggagcggctctgactgtgctggtggcgtcgaaggtggggctaccggtg 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 731 actatcgagttgggagcggctctgactgtgctggtggcgtcaaaggtggggctaccggtg 790
Query: 61 tccaccacgcactgtaaggtcggctctgtggtttgtgtgggatattcctccgaaaataag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tccaccacgcactgtaaggtcggctctgtggtttgtgtgggatattcctccgaaaataag 850
Query: 121 gtggactggagcttgtttaggaacataatatttgcgtgggtggtcactgtaccggcggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gtggactggagcttgtttaggaacataatatttgcgtgggtggtcactgtaccggcggtg 910
Query: 181 gcgggaatgtcatcgctcgctatgcttgctcttgaaaaattcgtcgtttaaaaacaacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 gcgggaatgtcatcgctcgctatgcttgctcttgaaaaattcgtcgtttaaaaacaacct 970
Query: 241 tacattttttaactgttagctatggatttatcttgaatgtaacgaattgttgaagtataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 tacattttttaactgttagctatggatttatcttgaatgtaacgaattgttgaagtataa 1030
Query: 301 aaaatgtattgattttcggatattatttaagcgatgcgttagtttattttattttagtct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 aaaatgtattgattttcggatattatttaagcgatgcgttagtttattttattttagtct 1090
Query: 361 agctgcaaccctaattgtaattaaatttttgaacatataatttacagtcactgtagatgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1091 agctgcaaccctaattgtaattaaatttttgaacatataatttacagtcactgtagatgc 1150
Query: 421 tgtagatgtctgctgctagaaattaaatctacgaccatagattatcatttttggtgttaa 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1151 tgtagatgtctgctgctagaaattaaatctacgaccatagattatcatttttggtgttca 1210
Query: 481 caaaaaaaagttaatttaaaattaaata 508
||||||||||||||||||||||||||||
Sbjct: 1211 caaaaaaaagttaatttaaaattaaata 1238
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 110,341
Number of extensions: 2536
Number of successful extensions: 2536
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2536
Number of HSP's successfully gapped: 1
Length of query: 731
Length of database: 8,280,457
Length adjustment: 16
Effective length of query: 715
Effective length of database: 8,128,713
Effective search space: 5812029795
Effective search space used: 5812029795
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 33 (65.9 bits)