BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17817 (UTR included)
(3268 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011A1F04 1552 0.0
BF01042B2E01 1532 0.0
>BF01011A1F04
Length = 800
Score = 1552 bits (783), Expect = 0.0
Identities = 795/800 (99%)
Strand = Plus / Plus
Query: 1048 cccgcgctcatctactcgtcatcaccatcaactataggataggtctattaggttatttaa 1107
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 cccgcgctcatctactcgtcatcaccatcaactannngataggtctattaggttatttaa 60
Query: 1108 caacggggacgtctgacgaggtgtcggcggcgggcggggcggctgtactagacatgaccg 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caacggggacgtctgacgaggtgtcggcggcgggcggggcggctgtactagacatgaccg 120
Query: 1168 cggcgctctcgtgggtcaaccggaacatcgcggcgttcggcggcgatccaaaaagactta 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cggcgctctcgtgggtcaaccggaacatcgcggcgttcggcggcgatccaaaaagactta 180
Query: 1228 ctctgctcggacacggtgccggcgctgcccttgtcaatgtgatacttatgctaccatcta 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctctgctcggacacggtgccggcgctgcccttgtcaatgtgatacttatgctaccatcta 240
Query: 1288 gtaaaggtctgattactcgtgcgttacttttgagcggctcagcgctcagcccgtccgctc 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtaaaggtctgattactcgtgcgttacttttgagcggctcagcgctcagcccgtccgctc 300
Query: 1348 tagcgcccgacgccgcgctcgccagagaacacacagctcaagctctacggtgttccaaag 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagcgcccgacgccgcgctcgccagagaacacacagctcaagctctacggtgttccaaag 360
Query: 1408 acactaacatgggcgaacattggttggcaacatgtatccgttcccgtcctctagcggttc 1467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acactaacatgggcgaacattggttggcaacatgtatccgttcccgtcctctagcggttc 420
Query: 1468 tgttagcagttgaagcgcctcacgcacgattcctggcaggttgggcaccttgtcctccag 1527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgttagcagttgaagcgcctcacgcacgattcctggcaggttgggcaccttgtcctccag 480
Query: 1528 cacaaccaacacgagctcttcacgctagtgaaaccttccttcagtgctcattagccgtcg 1587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cacaaccaacacgagctcttcacgctagtgaaaccttccttcagtgctcattagccgtcg 540
Query: 1588 tcgtcaccactaccgagagttaccagttctttagcgaggatgatatcagacacggttttg 1647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcgtcaccactaccgagagttaccagttctttagcgaggatgatatcagacacggttttg 600
Query: 1648 aggaagaacacaggagtcgtattctccgaacctacgtccggaacgtgtaccgctaccacc 1707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aggaagaacacaggagtcgtattctccgaacctacgtccggaacgtgtaccgctaccacc 660
Query: 1708 gaaacgaaatattcgcggcgatccgcaacgagtacactgactgggagaagccgatccaac 1767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaaacgaaatattcgcggcgatccgcaacgagtacactgactgggagaagccgatccaac 720
Query: 1768 atcccatcaacatccgcgacgcgacgctggaggcactcagcgatgctgcagtcgcagcac 1827
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 721 atcccatcaacatccgcgacgcgacgctggaggcactcagtgatgctgcagttgcagcac 780
Query: 1828 cagcgttgcgtcttgcacag 1847
||||||||||||||||||||
Sbjct: 781 cagcgttgcgtcttgcacag 800
>BF01042B2E01
Length = 789
Score = 1532 bits (773), Expect = 0.0
Identities = 785/789 (99%)
Strand = Plus / Plus
Query: 2123 cgaatacgatctaaatacacagcagtatttaagcataggtacaaaagttcgcacaaaaag 2182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgaatacgatctaaatacacagcagtatttaagcataggtacaaaagttcgcacaaaaag 60
Query: 2183 tcactaccgcggtcacaagatggctctgtggttgcacctcgtcccacaactacaccgccc 2242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcactaccgcggtcacaagatggctctgtggttgcacctcgtcccacaactacaccgccc 120
Query: 2243 cggcgccgctccccgacaccatcagtttagatcactgcaccccgacatgtttgcaggtga 2302
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 cggcgccgctccccgacaccatcagtttagatcactgcaccccgacatgttcgcaggtga 180
Query: 2303 aatattccctgagttacatacgacaccatctttggaggaggagagcactgaagaagagcc 2362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatattccctgagttacatacgacaccatctttggaggaggagagcactgaagaagagcc 240
Query: 2363 tgaagtagaggagtgcgagccgtcaccgtcggcacgaccagcgctctccgctatgactac 2422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaagtagaggagtgcgagccgtcaccgtcggcacgaccagcgctctccgctatgactac 300
Query: 2423 accacagcccacaccaaaggaagactccttgactaatttggactcccaatactatagtta 2482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 accacagcccacaccaaaggaagactccttgactaatttggactcccaatactatagtta 360
Query: 2483 cacggtggcgttaggcgtcacagttggagcgggttgtttcctcttggcattgaaccttct 2542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cacggtggcgttaggcgtcacagttggagcgggttgtttcctcttggcattgaaccttct 420
Query: 2543 cgtgttcgcggggatctatctccagcgagagaaacgaagagctaatagaagaccgagaag 2602
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 421 cgtattcgcggggatctatctccagcgagagaaaagaagagctaatagaagaccgagaag 480
Query: 2603 ggaaggtagctgcagtagccgaagtggttcagctcccatagccgagccaactatcacatc 2662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggaaggtagctgcagtagccgaagtggttcagctcccatagccgagccaactatcacatc 540
Query: 2663 acccaggaagagtacattaaagcgtagcagcgaggcagaattaagcgagagaccggcaaa 2722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acccaggaagagtacattaaagcgtagcagcgaggcagaattaagcgagagaccggcaaa 600
Query: 2723 cgcgccgccaaaaaaacgcgttcaaatacaagagatttctgtgtagatgacttctagtgt 2782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgcgccgccaaaaaaacgcgttcaaatacaagagatttctgtgtagatgacttctagtgt 660
Query: 2783 taaatggttgactggcttggagttatcagtcgcaaagaattccttatgtgactcggtgta 2842
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 661 taaatggttgactggcttggagttatcagtcgcaaagaattccttatgtgacttggtgta 720
Query: 2843 cgtgttatactctgaccaatatattgtggatgaaacttacataatgcatatgtatattgt 2902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgtgttatactctgaccaatatattgtggatgaaacttacataatgcatatgtatattgt 780
Query: 2903 gaagtacac 2911
|||||||||
Sbjct: 781 gaagtacac 789
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 323,766
Number of extensions: 5978
Number of successful extensions: 5978
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5978
Number of HSP's successfully gapped: 2
Length of query: 3268
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3250
Effective length of database: 8,109,745
Effective search space: 26356671250
Effective search space used: 26356671250
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)