BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17839 (UTR included)
(2755 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3198_C1 1865 0.0
>BF14_3198_C1
Length = 951
Score = 1865 bits (941), Expect = 0.0
Identities = 947/949 (99%)
Strand = Plus / Plus
Query: 310 agacgtctcgatcgcctccacgggccattcatgagttctgggtgtccgcctccaccagac 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agacgtctcgatcgcctccacgggccattcatgagttctgggtgtccgcctccaccagac 60
Query: 370 tcggagaaggtgattctacgagggttgtcaaagtactgccgtcagacaccgttccagcaa 429
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcggagaaggtgattctaccagggttgtcaaagtactgccgtcagacaccgttccagcaa 120
Query: 430 gaattacttcatttagtcgaagtatcgtcacaccctggaaggaaaatatatctttggctt 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaattacttcatttagtcgaagtatcgtcacaccctggaaggaaaatatatctttggctt 180
Query: 490 gcaacaaagttggtgttccaataccatcgacaacatggagaatgaatggtgcaattctag 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcaacaaagttggtgttccaataccatcgacaacatggagaatgaatggtgcaattctag 240
Query: 550 aatcgaccttgagaaaaaatgttaccagtgatggcacattgataattagcatgacacaat 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatcgaccttgagaaaaaatgttaccagtgatggcacattgataattagcatgacacaat 300
Query: 610 acgctgacagcggaaattacacgtgcctagttgaaaatactcatggtcgtgacgaggtga 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acgctgacagcggaaattacacgtgcctagttgaaaatactcatggtcgtgacgaggtga 360
Query: 670 cttacggtgtcgaagtgaaggtccctcctcaaccgcccgtgttagctgtggtcgactcgt 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttacggtgtcgaagtgaaggtccctcctcaaccgcccgtgttagctgtggtcgactcgt 420
Query: 730 acgctgattcactacacttacaatggagtgatcagggggacggtggcagccctattttag 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acgctgattcactacacttacaatggagtgatcagggggacggtggcagccctattttag 480
Query: 790 gatacgttataaactacaaacgggagcacggggactgggaggagcttcaagtggaggcgg 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatacgttataaactacaaacgggagcacggggactgggaggagcttcaagtggaggcgg 540
Query: 850 gtacatctgagcacgtgctgccaaacctttggtgcggaaccagataccagctatatatca 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtacatctgagcacgtgctgccaaacctttggtgcggaaccagataccagctatatatca 600
Query: 910 ctgccttcaaccgcatcggtactggcctaccatgcgatatcgtgcatgcatataccaagg 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctgccttcaaccgcatcggtactggcctaccatgcgatatcgtgcatgcatataccaagg 660
Query: 970 gcaccgtgcctgtgaaaccgaagcactcccagatgataactctcaacacgacaactgtga 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcaccgtgcctgtgaaaccgaagcactcccagatgataactctcaacacgacaactgtga 720
Query: 1030 cggtgtggctcgactcgtggggcgacggaggctgcgggatattgtacttcgttatagagt 1089
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 721 cggtgtggctcgactcgtggggcgacggaggctgcgggatattgtacttcgtcatagagt 780
Query: 1090 accgggagataagtcagtcgcagtggagattagtctcgaacagtgtgcaagcaacagaaa 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 accgggagataagtcagtcgcagtggagattagtctcgaacagtgtgcaagcaacagaaa 840
Query: 1150 gagtattcagtgtaacaggactgtcacccgccacgcactaccagctacggatcacagccc 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gagtattcagtgtaacaggactgtcacccgccacgcactaccagctacggatcacagccc 900
Query: 1210 ataacaacgcgggtcacgctttagcactttataattttactacacattc 1258
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ataacaacgcgggtcacgctttagcactttataattttactacacattc 949
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 235,048
Number of extensions: 4055
Number of successful extensions: 4055
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4055
Number of HSP's successfully gapped: 1
Length of query: 2755
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2738
Effective length of database: 8,119,229
Effective search space: 22230449002
Effective search space used: 22230449002
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)