BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17841 (UTR included)
(3322 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_319_C1 1725 0.0
BF14_1723_C1 1645 0.0
>BF14_319_C1
Length = 1178
Score = 1725 bits (870), Expect = 0.0
Identities = 876/878 (99%)
Strand = Plus / Plus
Query: 856 agcttcttcaatacaatgtaccaaacggcaagaagaaccgcgggctggcgactgtcttag 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 agcttcttcaatacaatgtaccaaacggcaagaagaaccgcgggctggcgactgtcttag 168
Query: 916 cctacaagatgctggagaaacctgatagattgaccccagaaaatatccacctagctaaca 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cctacaagatgctggagaaacctgatagattgaccccagaaaatatccacctagctaaca 228
Query: 976 tcatgggatggtgtacggaaatgttccacacacaccaactcctgctgaacgacataatgt 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tcatgggatggtgtacggaaatgttccacacacaccaactcctgctgaacgacataatgt 288
Query: 1036 ctggtactgagatgcgccgcggcgtcccgtgttggtatcgtcaaacaaacgtcggtatgg 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ctggtactgagatgcgccgcggcgtcccgtgttggtatcgtcaaacaaacgtcggtatgg 348
Query: 1096 ccgccatcaacgactcgtcattagtacagtcggcgatgtactcgacgctgaaaagaaact 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ccgccatcaacgactcgtcattagtacagtcggcgatgtactcgacgctgaaaagaaact 408
Query: 1156 tcatcaacaaaccatattataagaacgtactggaaatgttcaacgagatgctgttgaaat 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tcatcaacaaaccatattataagaacgtactggaaatgttcaacgagatgctgttgaaat 468
Query: 1216 gttcaatcggtaattacttggagaagcaaataatgaagacggataagccggacctaagct 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gttcaatcggtaattacttggagaagcaaataatgaagacggataagccggacctaagct 528
Query: 1276 tattcacaatggaaaaatatgaagctatcactaaatacaaaacgtcatactacaccttcc 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tattcacaatggaaaaatatgaagctatcactaaatacaaaacgtcatactacaccttcc 588
Query: 1336 aaatgccggtcggcttagcgcttctgatggcgggggtcgacgatccggagacacacagac 1395
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 589 aaatgccggtcggcttagcgctactgatggcgggggtcgacgatccggagacacacagac 648
Query: 1396 aagcaaaaactattctactagaaatgggagaattcttccaaattcaagacgacttcctag 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 aagcaaaaactattctactagaaatgggagaattcttccaaattcaagacgacttcctag 708
Query: 1456 attgtttcggcgagccgtcagttataggtaaaaatggtacagatattcaagacggcaaat 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 attgtttcggcgagccgtcagttataggtaaaaatggtacagatattcaagacggcaaat 768
Query: 1516 gcacctggttagctgtggtggcgttacagagggcgacaccggcgcagaagcagttaatgg 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 gcacctggttagctgtggtggcgttacagagggcgacaccggcgcagaagcagttaatgg 828
Query: 1576 aagatcactacggcagttcgaatatagaagacgttcagaagataaaggatctatacgagg 1635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 aagatcactacggcagttcgaatatagaagacgttcagaagataaaggatctatacgagg 888
Query: 1636 aactacaactgcctcacacttactcagtatacgaagaagccacatacgacctcctcagaa 1695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 aactacaactgcctcacacttactcagtatacgaagaagccacatacgacctcctcagaa 948
Query: 1696 cacagatacagcaagtcactagagggctacctcacgat 1733
|||||||||| |||||||||||||||||||||||||||
Sbjct: 949 cacagatacaacaagtcactagagggctacctcacgat 986
>BF14_1723_C1
Length = 889
Score = 1645 bits (830), Expect = 0.0
Identities = 875/890 (98%), Gaps = 2/890 (0%)
Strand = Plus / Plus
Query: 2280 tttgaaatggctcacaggcacaaaaaggactacagtctgttcacaacagagaaatataac 2339
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2 tttgaaatggctcacaggcacaaaaaggactacagtctgttnnnaacagagaaatataac 61
Query: 2340 tctatagcgaagtttaagaccgcgtactatacgtacaagcttcctgtttgtttgggatta 2399
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 62 tctatagcgaagtttaagaccgcgtactatacgtacaagcttcctgtttgtttgggttta 121
Query: 2400 ttattggcaaataagacagatcccgaaactcacaagagggctgagagtatatgtattgat 2459
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 122 ttattggcaaataagacagatcccgaaactcacaagagggctgagagtatatgcattgat 181
Query: 2460 ataggacttttgttccaaatgcaggatgacttcatagactgctttggagttgagacattg 2519
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ataggacgtttgttccaaatgcaggatgacttcatagactgctttggagttgagacattg 241
Query: 2520 actggtaagattggtaacgacatccaagaaggtaagtgttcttggctggcggtccaagca 2579
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 242 actggtaagattggtaacgacatccaagaaggtaaatgttcttggctggcggtccaagca 301
Query: 2580 ctacaacactgcagccaaaaacagaggactgtgttcgtgtcgtgctacggcagcccagaa 2639
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 302 ctacaacactgcagccaaaaacagaggactgtgttcgtatcgtgctacggcagcccagaa 361
Query: 2640 ccggcccatatagagagaattaagagattatatgaagaattagaactgccagcattatat 2699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccggcccatatagagagaattaagagattatatgaagaattagaactgccagcattatat 421
Query: 2700 cacaggactgagaaacatttgtatgacacgatcatcaagaatctagaacagttaccgccc 2759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cacaggactgagaaacatttgtatgacacgatcatcaagaatctagaacagttaccgccc 481
Query: 2760 gacagcatgtcaccaaagttatttgttaagctgcttgaccttatttatgataggaagaac 2819
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 482 gacagcatgtcaccaaagttatttattaagctgcttgaccttatttatgataggaagaac 541
Query: 2820 tgaacattaatatcaaagttatatataggacctaaaaaacttatgggttataggaaatga 2879
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 542 tgaacattaatatcaaagttatatataggacctaaaaaacttaagggttataggaaatga 601
Query: 2880 tgtttattggtgttcctcgtggaggctgcatgaatattataaggattcaatatcctcggg 2939
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 602 tgtttattggtgttcctcgtggaagctgcatgaatattataaggattcaatatcctcggg 661
Query: 2940 taacttactacttagaaactgtgttatatatacaaatcatatagaattttaatagagaat 2999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 taacttactacttagaaactgtgttatatatacaaatcatatagaattttaatagagaat 721
Query: 3000 tcagttttatattctgtattcaacgctatttttatttgatatatttttaataactgacta 3059
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 722 tcaggtttatattctgtattcaaagctatttttatttgatatatttttaataactgacta 781
Query: 3060 ttttgtatacacttgtagttatatatatatatatatttaggcacttgattgaagtaacat 3119
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ttttgtatacacttgtagt--tatatatatatatatttaggcacttgattgaagtaacat 839
Query: 3120 tttaatgtccactgacaattgtacataaaataataatacaaagtattgaa 3169
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tttaatgtccactgacaattgtacataaaataataatacaaagtattgaa 889
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 463,264
Number of extensions: 28264
Number of successful extensions: 28264
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 28261
Number of HSP's successfully gapped: 2
Length of query: 3322
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3304
Effective length of database: 8,109,745
Effective search space: 26794597480
Effective search space used: 26794597480
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)