BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17887 (UTR included)
(1576 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021A2E11 1207 0.0
>BF01021A2E11
Length = 648
Score = 1207 bits (609), Expect = 0.0
Identities = 630/637 (98%)
Strand = Plus / Plus
Query: 334 tgccaaccgttaacgcgggatctgatttcgatttgctcattttcacacaacaatggcctg 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tgccaaccgttaacgcgggatctgatttcgatttgctcattttcacacaacaatggcctg 71
Query: 394 caacagcttgcaaagaatggaagaagcataatccttcccacacatgctcaatgccaaaaa 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 caacagcttgcaaagaatggaagaagcataatccttcccacacatgctcaatgccaaaaa 131
Query: 454 attccgagacctggactatacacggcatttggcccacaaaaatgggaatgatcggaccag 513
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 132 attccgagacctggactatacacggcatttggcccacaaaaatgggtatgatcggaccag 191
Query: 514 ccttctgtaataggacgtggtttttcgatcccgaaaagataaggcctattgaagaggagt 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ccttctgtaataggacgtggtttttcgatcccgaaaagataaggcctattgaagaggagt 251
Query: 574 tattacaaaaatggccaaacatttatggaggtacttcagaatatgctctctggtctcatg 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tattacaaaaatggccaaacatttatggaggtacttcagaatatgctctctggtctcatg 311
Query: 634 aatgggccaaacatggcacctgtgctgccatcctcaaacctctcaactctgaactaaatt 693
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 312 aatgggccaaacatggcacctgtgccgccatcctcaaacctctcaattctgaactaaatt 371
Query: 694 attttcaaaatggcctagaattcctcaaaacattcacaatgaccgacatacttgaaaaaa 753
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 372 attttcaaaatggcctagaattcctcaaaacgttcacaatgaccgacatacttgaaaaaa 431
Query: 754 atagtattgtgccatcaaatactgaaaaatacacagttgctgatatacacgacgcaatca 813
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atagtatagtgccatcaaatactgaaaaatacacagttgctgatatacacgacgcaatca 491
Query: 814 aacagagaataaataaaaatcccgtaatagagtgcaaggtagaggaaggaggggacaact 873
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 492 aacagagaataaataaaaatcccttaatagagtgcaaggtggaggaaggaggggacaact 551
Query: 874 atatatctgagatcaggatttgcttcacaaaagagctccaactgacagactgcgatggag 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 atatatctgagatcaggatttgcttcacaaaagagctccaactgacagactgcgatggag 611
Query: 934 tcgtaactcagaaatatggatatggaggtatacttac 970
|||||||||||||||||||||||||||||||||||||
Sbjct: 612 tcgtaactcagaaatatggatatggaggtatacttac 648
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 248,378
Number of extensions: 5513
Number of successful extensions: 5513
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5513
Number of HSP's successfully gapped: 1
Length of query: 1576
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1559
Effective length of database: 8,119,229
Effective search space: 12657878011
Effective search space used: 12657878011
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)