BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17889 (UTR included)
(1420 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022B2G12 1473 0.0
>BF01022B2G12
Length = 809
Score = 1473 bits (743), Expect = 0.0
Identities = 785/798 (98%), Gaps = 2/798 (0%)
Strand = Plus / Plus
Query: 465 tagtacacctaaagataaaaatatatatttgttataatgaaattcgtagcaatttttctg 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tagtacacctaaagataaaaatatatatttgttataatgaaattcgtagcaatttttctg 71
Query: 525 atttttgccttaacggcactgcaatgtgaaggaaaaacgtttacgagatgcgagcttgtg 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atttttgccttaacggcactgcaatgtgaaggaaaaacgtttacgagatgcgagcttgtg 131
Query: 585 gcacagctcagaagccatggattccctgagaacaagatgagagattgggtttgtctcgtg 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gcacagctcagaagccatggattccctgagaacaagatgagagattgggtttgtctcgtg 191
Query: 645 gagcacgagagtgggcggaacacgagcaagataggaaaggtcaataagaacggctccagg 704
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gagaacgagagtgggcggaacacgagcaagataggaaaggtcaataagaacggctccagg 251
Query: 705 gactacggcctgttccagatcaacgacaagtactggtgcagcaacaccagtagtaagggg 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gactacggcctgttccagatcaacgacaagtactggtgcagcaacaccagtagtaagggg 311
Query: 765 aaggactgcaacgtcacttgtgcggaggtgagccaagatgatataactaaagccgcgacg 824
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 312 aaggactgcaacgtcacttgtgctgaggtgagccaagatgatataactaaagccgcgacg 371
Query: 825 tgcgctaaaaagatcttcaagagacacggcttcaacgcctggtacggatggaagaaccac 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgcgctaaaaagatcttcaagagacacggcttcaacgcctggtacggatggaagaaccac 431
Query: 885 tgccagggagctctcccagacatcagttcctgttagatgctataatactcctcaatacct 944
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||
Sbjct: 432 tgccagggagctctcccagacatcagttcctgttagatgctataatattactcaatatct 491
Query: 945 gtattatcctcagtctaaacacttgcatgtttataagaatcatgtacactgtacacaaat 1004
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gtactatcctcagtctaaacacttgcatgtttataagaatcatgtacactgtacacaaat 551
Query: 1005 gtataagacatttaaaaatatcttaataagctattatttacgtataaataaattattgta 1064
|||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 552 gtataagaaatttaaaaatatcttaataagctattatttacgtgtaaataaattattgta 611
Query: 1065 aagatatgtttttttt--attattcttcacaatataaatatttgattgttcatcgttgcc 1122
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 aagatatgtttttttttaattattcttcacaatataaatatttgattgttcatcgttgcc 671
Query: 1123 ttagattgagtaagacgtgaatatgatgtaaaaaaatatgtccaaaatttattccatgtt 1182
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ttagattgaatgagacgtgaatatgatgtaaaaaaatatgtccaaaatttattccatgtt 731
Query: 1183 aaatgaagttaagctgaatataagctaaacttaattattttaaactaagcgagaatactt 1242
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 aaatgaagttaggctgaatataagctaaacttaattattttaaactaagcgagaatactt 791
Query: 1243 cgccgttatctctgcttg 1260
||||||||||||||||||
Sbjct: 792 cgccgttatctctgcttg 809
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 209,404
Number of extensions: 5346
Number of successful extensions: 5346
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5345
Number of HSP's successfully gapped: 1
Length of query: 1420
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1403
Effective length of database: 8,119,229
Effective search space: 11391278287
Effective search space used: 11391278287
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)