BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17907 (UTR included)
(1909 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014B2A09 1154 0.0
>BF01014B2A09
Length = 782
Score = 1154 bits (582), Expect = 0.0
Identities = 594/598 (99%)
Strand = Plus / Plus
Query: 580 gctctgtaagcggcgtaataccacaccagcggcataaatccctcaaaattacacgaattc 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gctctgtaagcggcgtaataccacaccagcggcataaatccctcaaaattacacgaattc 244
Query: 640 aatcaccaagcaccaaacccgacacgctgagtttctcagatcccttcgggcctcctcagt 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aatcaccaagcaccaaacccgacacgctgagtttctcagatcccttcgggcctcctcagt 304
Query: 700 cctcggacggggggggcccatccacccctcagcccgccatgaccacccaggagctagatc 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cctcggacggggggggcccatccacccctcagcccgccatgaccacccaggagctagatc 364
Query: 760 accatcaccacctcggtggatcacaaacaccccacgatatatccaactccactaactcaa 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 accatcaccacctcggtggatcacaaacaccccacgatatatccaactccactaactcaa 424
Query: 820 cgcccactaacgtctcatcgaaatcagcctttatagagcttcaacaacacggctatggcc 879
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 425 cgcccactaacgtctcatcgaaatcagccttcatagaacttcaacaacacggctatggcc 484
Query: 880 ccttcaaggggggctatcaacacccccaccattttggcagcccgggtggtcaacagaatc 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ccttcaaggggggctatcaacacccccaccattttggcagcccgggtggtcaacagaatc 544
Query: 940 cccacgaagcctcaggtttccctagccccagatccttaggttatccattcccccctatgc 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 545 cccacgaagcctcaggtttccctagccccagatccttaggttatccattcccccccatgc 604
Query: 1000 atcagaacacctacggttatcatttaggatcctacgcccctcaatgtgcaagccctccga 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 atcagaacacctacggttatcatttaggatcctacgcccctcaatgtgcaagccctccga 664
Query: 1060 aagatgaaaaatgcggcctctcagatgatcccggtttacgcgtgaatgggaaggggaaga 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 aagatgaaaaatgcggcctctcagatgatcccggtttacgcgtgaatgggaaggggaaga 724
Query: 1120 agatgagaaagccgcgcacgatatactccagcttgcagctgcagcagctcaatcgacg 1177
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 725 agatgagaaagccgcgcacgatatactccagcttgcagctacagcagctcaatcgacg 782
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 222,709
Number of extensions: 4262
Number of successful extensions: 4262
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4262
Number of HSP's successfully gapped: 1
Length of query: 1909
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1892
Effective length of database: 8,119,229
Effective search space: 15361581268
Effective search space used: 15361581268
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)