BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17923 (UTR included)
(1717 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 1538 0.0
BF01049A2D11 210 5e-54
BF14_729_C1 194 3e-49
BF01011A1H06 165 3e-40
BF01012A1B09 133 1e-30
BF01044B2E12 127 6e-29
BF01019B1G10 123 1e-27
BF01024A1H07 117 6e-26
BF14_729_C2 113 9e-25
BF01017A2H11 101 4e-21
BF01056A1B08 96 2e-19
BF01035X1C09 94 9e-19
BF01005B1E12 92 3e-18
BF01058B2C06 90 1e-17
BF01025A1D01 90 1e-17
BF01012A2C11 88 5e-17
BF14_2189_C1 88 5e-17
BF01012B1C01 86 2e-16
BF01052B1F12 76 2e-13
BF01014A1H02 76 2e-13
BF01047B2B04 74 8e-13
BF01033B1B03 74 8e-13
BF01022B1H01 74 8e-13
BF01062A1H02 72 3e-12
BF01045B1C07 72 3e-12
BF01042A2B06 70 1e-11
BF01018A2H04 70 1e-11
BF01010A2A12 70 1e-11
BF01049B2H03 68 5e-11
>BF14_729_C3
Length = 2041
Score = 1538 bits (776), Expect = 0.0
Identities = 836/856 (97%), Gaps = 1/856 (0%)
Strand = Plus / Plus
Query: 514 agagagcccaacatctttgtgatgctgaccacctagaggccgagctgcagcatgtaaaac 573
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 agagagcccaacacctttgtgatgctgaccacctagaggccgagctgcagcatgtaaaac 906
Query: 574 atgctctcaccatcaacaacctgcccgtgcctcgccagcatcgcaagaaccatttgaagc 633
|||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 907 atgctctcactatcaacaacctgcccgtgcctcgccagcatcgcaagaaccacctgaagc 966
Query: 634 cacccacagttgaacgacaacctgcgatactaccatatgtgaagggagttactgacagaa 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 cacccacagttgaacgacaacctgcgatactaccatatgtgaagggagttactgacagaa 1026
Query: 694 taggcaacatcttgaagaaggtttccattaaaactatttacaaaccacataagaaagtga 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 taggcaacatcttgaagaaggtttccattaaaactatttacaaaccacataagaaagtga 1086
Query: 754 gccaattcctgagaccaatcaagagtaacattcctttgcaacaagcgggtgtatacaaac 813
|||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 1087 gccaattcttgagaccaatcaaaagtaacattcctttacaacaagcgggtgtatacaaac 1146
Query: 814 tcgattgtgactgtggcttgtcatacattggacagacgaagaggagcatcggtactaggg 873
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 1147 tcgactgtgactgtggcttgtcatacattggacagacgaagaggagcatcggtacaagag 1206
Query: 874 ttaaagaacacatctcagacatcaaaaacaggcgcgcgtcgaagtcagcagtgtgtgaac 933
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1207 ttaaggaacacatctcagacatcaaaaacaggcgcgcgtcgaagtcagcagtgtgtgaac 1266
Query: 934 acacaatggacaaaccaggccactacattcggtttgataaacctcaaatcctcgctcggg 993
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1267 acacaatggacaaaccaggccactacattcgttttgataaacctcaaatcctcgctcggg 1326
Query: 994 aagacaagtatataccgagattaattcgcgaggctattgaaattaaaaaacatcccaatt 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 aagacaagtatataccgagattaattcgcgaggctattgaaattaaaaaacatcccaatt 1386
Query: 1054 tcaatagagaagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataa 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1387 tcaatagagaagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataa 1446
Query: 1114 aatcccatgtccgaaaccacaccgcaggacctcaagacaccgtgagcgcattctgccggc 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1447 aatcccatgtccgaaaccacaccgcaggacctcaagacaccgtgagcgcattctgccggc 1506
Query: 1174 atccagagcggtacgccagaaaattaagaaatcgatggcggtagatgataaataacaagg 1233
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1507 atccagagcggtacgccannnnattaagaaatcgatggcggtagatgataaataacaagg 1566
Query: 1234 accaactgacagacattcacacctcgtctgcccgtgatcacggttgctgcaaagtaaccg 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1567 accaactgacagacattcacacctcgtctgcccgtgatcacggttgctgcaaagtaaccg 1626
Query: 1294 aaacgtcgggattatgtagtttttaaataataaaatccacgtagtaaatccgaataaata 1353
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||
Sbjct: 1627 aaacgtcgggattatgtagtttttaaataataaaatccgcgtagtatatccgaat-aata 1685
Query: 1354 ctagtttcatttaaat 1369
|||| |||||||||||
Sbjct: 1686 ctagcttcatttaaat 1701
>BF01049A2D11
Length = 776
Score = 210 bits (106), Expect = 5e-54
Identities = 149/162 (91%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 831 ttgtcatacattggacagacgaagaggagcatcggtactagggttaaagaacacatctca 890
|||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||
Sbjct: 614 ttgtcatacattggacagacaaagaggagcatcgatacaagggttaaagaacacatctca 673
Query: 891 gacatcaa-aaacaggcgcgcgtcgaagtcagcagtgtgtgaacacacaatggacaaacc 949
|| |||| ||| ||| | | |||||||||||||| |||||||||||||||||||||||
Sbjct: 674 gaaatcatgaaataggtgtacatcgaagtcagcagtatgtgaacacacaatggacaaacc 733
Query: 950 aggccactacattcggtttgataaacctcaaatcctcgctcg 991
||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 734 aggccactacattcggtttgataaaccacaaatcctcgctcg 775
>BF14_729_C1
Length = 981
Score = 194 bits (98), Expect = 3e-49
Identities = 132/142 (92%), Gaps = 1/142 (0%)
Strand = Plus / Minus
Query: 676 agggagttactgacagaataggcaacatcttgaagaaggtttccattaaaactatttaca 735
|||||||||||||||||||||||||||| ||||||||| ||||||| || |||||| |||
Sbjct: 142 agggagttactgacagaataggcaacattttgaagaagctttccatcaagactattcaca 83
Query: 736 aaccacataagaaagtgagccaattcctgagaccaatcaagagtaacattcctttgcaac 795
|||||||||||||||||||||||||| ||||||| ||||||||||||||| | ||| |||
Sbjct: 82 aaccacataagaaagtgagccaattcttgagacctatcaagagtaacatt-cattggaac 24
Query: 796 aagcgggtgtatacaaactcga 817
||||||||||||||||||||||
Sbjct: 23 aagcgggtgtatacaaactcga 2
>BF01011A1H06
Length = 739
Score = 165 bits (83), Expect = 3e-40
Identities = 152/171 (88%), Gaps = 3/171 (1%)
Strand = Plus / Plus
Query: 1201 gaaatcgatggcggtagatgataaataacaaggaccaactgacagacattcacacctcgt 1260
|||||||||||||| || |||| ||||||||||||||||||||||||| ||||| |||||
Sbjct: 406 gaaatcgatggcggcagttgatgaataacaaggaccaactgacagacactcacatctcgt 465
Query: 1261 ctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagt-tttta- 1318
|||||||||||||||||| ||| ||||||||||||||||||||| |||||||| |||||
Sbjct: 466 ctgcccgtgatcacggttactgaaaagtaaccgaaacgtcgggagtatgtagtcttttac 525
Query: 1319 aataataaaatccacgtagtaaatccgaataaatactagtttcatttaaat 1369
|| |||||| | |||||| ||||||| ||||||||| |||||||||||
Sbjct: 526 aaaaataaatcacgcgtagtttatccgaa-aaatactagattcatttaaat 575
>BF01012A1B09
Length = 841
Score = 133 bits (67), Expect = 1e-30
Identities = 98/107 (91%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 1263 gcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagtttttaaata 1322
|||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 841 gcccgtgatcacggctgctgaaaagtaaccgaaacgtcgggattatgtagttttaaaata 782
Query: 1323 ataaaatccacgtagtaaatccgaataaatactagtttcatttaaat 1369
||||||||| |||||| ||||||| | ||| |||||||||||||||
Sbjct: 781 ataaaatccgcgtagtgtatccgaa-atatattagtttcatttaaat 736
>BF01044B2E12
Length = 823
Score = 127 bits (64), Expect = 6e-29
Identities = 80/85 (94%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 1285 aagtaaccgaaacgtcgggattatgtagtttttaaataataaaatccacgtagtaaatcc 1344
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 1 aagtaaccgaaacgtcgggattatgtagnnnttaaataataaaatccgcgtagtaaatcc 60
Query: 1345 gaataaatactagtttcatttaaat 1369
||| |||||||||||||||||||||
Sbjct: 61 gaa-aaatactagtttcatttaaat 84
>BF01019B1G10
Length = 488
Score = 123 bits (62), Expect = 1e-27
Identities = 99/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 1239 ctgacagacattcacacctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacg 1298
||||||| |||||| | ||| ||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 419 ctgacagccattcatatctcatctgcccgtgatcacggttactgaaaaggaaccgaaacg 360
Query: 1299 tcgggattatgtagttttt-aaataataaaatccacgtagtaaatccgaa 1347
||||||||||||||||||| |||||||||||| | |||||||||| ||||
Sbjct: 359 tcgggattatgtagtttttaaaataataaaattcgcgtagtaaatgcgaa 310
>BF01024A1H07
Length = 726
Score = 117 bits (59), Expect = 6e-26
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 1256 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagttt 1315
||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||| ||
Sbjct: 648 ctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcngnattatgtagntt 707
Query: 1316 ttaaataataaaatcc 1331
| ||||||||||||||
Sbjct: 708 taaaataataaaatcc 723
>BF14_729_C2
Length = 1289
Score = 113 bits (57), Expect = 9e-25
Identities = 103/116 (88%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 1256 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagttt 1315
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 529 ctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggagtatgtagttt 588
Query: 1316 ttaa--ataataaaatccacgtagtaaatccgaataaatactagtttcatttaaat 1369
|||| | |||||| | |||||| |||||||||| | ||||||||||||||||
Sbjct: 589 ttaacaaaaataaagcacgcgtagtttatccgaataatt-ctagtttcatttaaat 643
>BF01017A2H11
Length = 713
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 1234 accaactgacagacattcacacctcgtctgcccgtgatcacggttgctgcaaagtaaccg 1293
||||||||||| ||| ||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 12 accaactgacatacactcacatctcgtctgcccgtgatcacggttgctgaaaagtaacca 71
Query: 1294 aaacgtcggga 1304
|||||||||||
Sbjct: 72 aaacgtcggga 82
>BF01056A1B08
Length = 761
Score = 95.6 bits (48), Expect = 2e-19
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1246 acattcacacctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggat 1305
||||||||| |||||| |||||||| ||||||| ||| |||| |||||||||||||||||
Sbjct: 250 acattcacatctcgtccgcccgtgaccacggttcctgaaaagcaaccgaaacgtcgggat 191
Query: 1306 tatgtagtttttaaataataaaatccacgtagtaaatccgaataaatactagtttcattt 1365
| ||| ||||| ||||||||||| | || || | | ||||| | ||| |||||||||||
Sbjct: 190 tgtgttgttttaaaataataaaaaacgcgcagcacacccgaaaatatattagtttcattt 131
Query: 1366 aaat 1369
||||
Sbjct: 130 aaat 127
>BF01035X1C09
Length = 778
Score = 93.7 bits (47), Expect = 9e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 1256 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagtt 1314
||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 663 ctcgtcttcccgtgatcacggttgctgcaaagtaaccgaaacgttgggataatgtagtt 605
>BF01005B1E12
Length = 657
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 1256 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatg 1309
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 304 ctcgtctggccgtgatcacggttgctgcaaagtaaccgaaacctcgggattatg 357
>BF01058B2C06
Length = 772
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 1256 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagttt 1315
|||||||| |||||||||||| ||| ||||||||||||||||||||||| ||||||||||
Sbjct: 481 ctcgtctggccgtgatcacggctgcagcaaagtaaccgaaacgtcgggaatatgtagttt 422
Query: 1316 t 1316
|
Sbjct: 421 t 421
>BF01025A1D01
Length = 764
Score = 89.7 bits (45), Expect = 1e-17
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 1256 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcggga 1304
||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 483 ctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcggga 435
>BF01012A2C11
Length = 780
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 1266 cgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagtttttaaat 1321
||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 293 cgtgatcacggttgctgcaaagtaaccgaaacgtcgggagcatttagtttttaaat 238
>BF14_2189_C1
Length = 1416
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 1248 attcacacctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggatta 1307
||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 152 attcacatgtcgtctgtccgtgatcacggttgctgcaaagtaacagaaacgtcgggacta 211
Query: 1308 tgta 1311
||||
Sbjct: 212 tgta 215
>BF01012B1C01
Length = 950
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 1256 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagtt 1314
|||||||| |||||||||||| ||||||||||||||||||||||||||| | |||||||
Sbjct: 654 ctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtcgggagtgtgtagtt 712
>BF01052B1F12
Length = 785
Score = 75.8 bits (38), Expect = 2e-13
Identities = 100/117 (85%), Gaps = 4/117 (3%)
Strand = Plus / Minus
Query: 1256 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagttt 1315
||||||||||||||||||||||||||| ||||| |||| ||| |||||| ||||||| ||
Sbjct: 443 ctcgtctgcccgtgatcacggttgctgaaaagtcaccgtaacatcgggagtatgtagctt 384
Query: 1316 --tta-aataataaaatccacgtagtaaatccgaataaatactagtttcatttaaat 1369
||| || ||||||| | || |||| ||||||| ||||| |||||||||||||||
Sbjct: 383 ccttacaaaaataaaagacgcgaagtatatccgaa-aaatattagtttcatttaaat 328
>BF01014A1H02
Length = 787
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 1256 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagt 1313
||||||||||||||||||||||||||| |||| ||| ||||||||||| || ||||||
Sbjct: 255 ctcgtctgcccgtgatcacggttgctgtaaaggaacggaaacgtcggggttgtgtagt 312
>BF01047B2B04
Length = 762
Score = 73.8 bits (37), Expect = 8e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 1256 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagttt 1315
|||| ||| ||||||||||||||||||| |||||| ||||||||||||| ||| ||| ||
Sbjct: 218 ctcgcctgaccgtgatcacggttgctgcgaagtaaacgaaacgtcgggagtatttag-tt 160
Query: 1316 ttaaataataaaa 1328
| |||||||||||
Sbjct: 159 taaaataataaaa 147
>BF01033B1B03
Length = 826
Score = 73.8 bits (37), Expect = 8e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 1256 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcggga 1304
|||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 226 ctcgtctgcctatgatcacggttgctgcaaagtaaccgaaaagtcggga 178
>BF01022B1H01
Length = 596
Score = 73.8 bits (37), Expect = 8e-13
Identities = 86/101 (85%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 1209 tggcggtagatgataaataacaaggaccaactgacagacattcacacctcgtctgcccgt 1268
|||||| |||| || ||||||| ||||||||| ||||| ||| || ||||| | | |||
Sbjct: 246 tggcggaagatcattaataaca-ggaccaactaacagatattttcatctcgtttactcgt 304
Query: 1269 gatcacggttgctgcaaagtaaccgaaacgtcgggattatg 1309
|||||||||||||||| |||||||||||| || ||||||||
Sbjct: 305 gatcacggttgctgcagagtaaccgaaacctcaggattatg 345
>BF01062A1H02
Length = 876
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 1265 ccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagtttttaaa 1320
|||||||| |||||||||| ||||||||||||| ||| || |||||||||||||||
Sbjct: 281 ccgtgatcgcggttgctgcgaagtaaccgaaacttcgtgagtatgtagtttttaaa 336
>BF01045B1C07
Length = 805
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 1267 gtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagtttttaaataataa 1326
|||||||||| |||||||| ||| ||||||||||||| |||||||||| |||||||||
Sbjct: 695 gtgatcacggatgctgcaatataatcgaaacgtcgggagtatgtagtttaaaaataataa 754
Query: 1327 aatccacgtagt 1338
||| | ||||||
Sbjct: 755 aatacgcgtagt 766
>BF01042A2B06
Length = 781
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1266 cgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagtttt 1316
|||||| ||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 237 cgtgattacggttgctgcgaagtaaccgaaacgtcgtgagtatgtagtttt 287
>BF01018A2H04
Length = 679
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 1260 tctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgg 1302
||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 263 tctgcccgtgatcacggttactgcaaagtaaccgaaacctcgg 305
>BF01010A2A12
Length = 502
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 1245 gacattcacacctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcggg 1303
|||||||| | |||| ||||||| ||||| ||| |||||||||||||||||||||||||
Sbjct: 3 gacattcatatctcgcctgcccgcgatcatggtcgctgcaaagtaaccgaaacgtcggg 61
>BF01049B2H03
Length = 832
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 1258 cgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagttt 1315
||||||||| | |||||||||||||| ||||||||||||||| || | ||||||||||
Sbjct: 274 cgtctgcccctaatcacggttgctgcgaagtaaccgaaacgtaggtagtatgtagttt 217
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 230,415
Number of extensions: 4781
Number of successful extensions: 4781
Number of sequences better than 1.0e-10: 29
Number of HSP's gapped: 4774
Number of HSP's successfully gapped: 30
Length of query: 1717
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1700
Effective length of database: 8,119,229
Effective search space: 13802689300
Effective search space used: 13802689300
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)