BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17928 (UTR included)
(3807 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039A2C06 1417 0.0
BF01041B2D01 971 0.0
>BF01039A2C06
Length = 791
Score = 1417 bits (715), Expect = 0.0
Identities = 772/791 (97%)
Strand = Plus / Plus
Query: 2172 gagcaattcaaagcaagagcggagaatgataaatacaaaagcgcaccattcaagtgtaca 2231
|||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||
Sbjct: 1 gagcaattcaaagcaagagcagagaatgagaaatacaaaagtgcaccattcaagtgcaca 60
Query: 2232 gattgttttaaaggtttctcaaaagagaatatattaaagagacatagaatcttgaggcat 2291
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gattgtttgaaaggtttctcaaaagagaatatattaaagagacatagaatcttgaggcat 120
Query: 2292 aatgaaatatataaaatagaatgtccattttgtcacatgcgttttaaattaaattgtttc 2351
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 121 aatgaaatatataaaatagaatgtccattttgtcacatgcgttttaagttaaattgtttc 180
Query: 2352 atgcagaaacatttgcggggccattacactaagtatgaatgcaggaggtgtaatgtggtg 2411
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgcagaaacatttgaggggccattacactaagtatgaatgcaggaggtgtaatgtggtg 240
Query: 2412 tatcccttggagggttcagcattgttccacgaggagttccacagcggtgtcataagaacc 2471
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 241 tatcccttggagggttcagcattgttccacgaggagttccacagaggtgtcataagaacc 300
Query: 2472 tgcagacactgcaatgaggagttccgtcactcgtcaacatattattctcacctccgaaca 2531
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcagacactgcaacgaagagttccgtcactcgtcaacatattattctcacctccgaaca 360
Query: 2532 cataagagtgagttcgtgtgttgtgtgtgcgggtcgtcgttcgtcagcgaggccggactc 2591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cataagagtgagttcgtgtgttgtgtgtgcgggtcgtcgttcgtcagcgaggccggactc 420
Query: 2592 catcaacacaagcggatcaaacactgtgacagtgttgaatcccctgacgatgaggagatg 2651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catcaacacaagcggatcaaacactgtgacagtgttgaatcccctgacgatgaggagatg 480
Query: 2652 aacactttttgcactaagtgtgacatcagctttgagagcaggccggcctacgacgagcat 2711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aacactttttgcactaagtgtgacatcagctttgagagcaggccggcctacgacgagcat 540
Query: 2712 ctactgcattccatcaaacacatagaagacattgagaatgataatgaagttgttcaagac 2771
|| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctgctgcattccgtaaaacacatagaagacattgagaatgataatgaagttgttcaagat 600
Query: 2772 aaacggaagaaggttttgggcaagagaatgaaggaaaagataaccggtcaattgtccaag 2831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaacggaagaaggttttgggcaagagaatgaaggaaaagataaccggtcaattgtccaag 660
Query: 2832 aagtcaaggaatatgacaaagtcggagaggaagagttgtaagagaagaagacaaccaagg 2891
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 661 aagtcaaggaatatgactaagtcggagaggaagagttgtaagagaagaagacaaccgagg 720
Query: 2892 aaaccaaccacctgtcatcagtgcggtaaacatttcgacacccaggcggcgtgcatgaag 2951
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 721 aaaccaaccacctgtcatcagtgcggtaaacatttcgacaccccagcggcgtgcatgaag 780
Query: 2952 caccacgtgac 2962
|| ||||||||
Sbjct: 781 catcacgtgac 791
>BF01041B2D01
Length = 772
Score = 971 bits (490), Expect = 0.0
Identities = 531/545 (97%), Gaps = 6/545 (1%)
Strand = Plus / Plus
Query: 1578 gaaactaagctttacaacgtgcaccaataccaactgaaaacgtattatgatgaagtgata 1637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gaaactaagctttacaacgtgcaccaataccaactgaaaacgtattatgatgaagtgata 293
Query: 1638 aataatattaactccgatatggatgatctaccccaatacttctgtttcgagtgtgcatat 1697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 aataatattaactccgatatggatgatctaccccaatacttctgtttcgagtgtgcatat 353
Query: 1698 ttgctgtataagtttcacaagttcaaagaaaagtgtagtattggttataaaatactgaca 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ttgctgtataagtttcacaagttcaaagaaaagtgtagtattggttataaaatactgaca 413
Query: 1758 gagatgttgtgtcgaggcccaataaccaacaacacaattaacgattcatatacatttaat 1817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gagatgttgtgtcgaggcccaataaccaacaacacaattaacgattcatatacatttaat 473
Query: 1818 tcaaatatgaaaccatcattaaagatagtgaatgtgttcgaaattaactatactttcaaa 1877
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 474 tcaaatatgaaaccatcattaaagatagttaatttgttcgaaattaactatactttcaaa 533
Query: 1878 gaggagccgaaatatgaagaaattcatacaaaagttgagaatgttgatactgaaattgat 1937
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gaggagcccaaatatgaagaaattcatacaaaagttgagaatgttgatactgaaattgat 593
Query: 1938 aacaatgtatatactggtgaagacaatcaggatatagatacaaatgctaaatatatagac 1997
| ||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||
Sbjct: 594 atcaatgtatatactggtgaagataataaggatatagatacaaatgccaaatatatagac 653
Query: 1998 tcacttaatacagaagatgagcttaatatatatgaacataaaaatccaaatgaatccaaa 2057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tcacttaatacagaagatgagcttaatatatatgaacataaaaatccaaatgaatccaaa 713
Query: 2058 tcactacacacatatgataatgaaaatgatagtaaaaacggaatactaagacataagatc 2117
||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 714 tcactacacacat------atgaaaatgatagtaaaaacggaatactaagaaataagatc 767
Query: 2118 tcatt 2122
|||||
Sbjct: 768 tcatt 772
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 408,890
Number of extensions: 7459
Number of successful extensions: 7459
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7459
Number of HSP's successfully gapped: 3
Length of query: 3807
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3789
Effective length of database: 8,109,745
Effective search space: 30727823805
Effective search space used: 30727823805
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)