BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17939 (UTR included)
(1661 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2205_C1 1647 0.0
>BF14_2205_C1
Length = 1206
Score = 1647 bits (831), Expect = 0.0
Identities = 852/859 (99%)
Strand = Plus / Plus
Query: 500 aatgaagctcctaacggtagtaacaatcttcgcggttgcggtttcaacgcaagcaaggac 559
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 27 aatgaagctcctaacggtagtaacaatcttcgcggttgccgtttcaacgcaagcaaggac 86
Query: 560 tgcggtaagacagcagtctgtcagtggacacatcacatcgctgagcgataaggatgcccg 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 tgcggtaagacagcagtctgtcagtggacacatcacatcgctgagcgataaggatgcccg 146
Query: 620 ccagaaggccagtgtccacccagcattcgcgaacgccggcacaaaggctggactcgaaat 679
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ccagaaggccagcgtccacccagcattcgcgaacgccggcacaaaggctggactcgaaat 206
Query: 680 atggagaattgagaacttcgatcccgtcgcagtgccagccgcagaacatggaaagttcta 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atggagaattgagaacttcgatcccgtcgcagtgccagccgcagaacatggaaagttcta 266
Query: 740 caagggagattcatatattgtcctaaaaactacatcagataaaaaaaagaatttatcctg 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 caagggagattcatatattgtcctaaaaactacatcagataaaaaaaagaatttatcctg 326
Query: 800 ggatatccattactggattggcagcgagtcatcccaggacgagtccggagctgctgctat 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ggatatccattactggattggcagcgagtcatcccaggacgagtccggagctgctgctat 386
Query: 860 actgtctgtgggtctggatgataaattcaacgataaggcgatacagcacagagaagccat 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 actgtctgtgggtctggatgataaattcaacgataaggcgatacagcacagagaagccat 446
Query: 920 gggttacgagagccagcagttccttggatacttcaagaacggcgctgtacgttacctcga 979
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 447 gggttacgagagccagcagttccttggatacttcaagaatggcgctgtacgttacctcga 506
Query: 980 cggaggtcacgactccgggttcaaccacgtggtcacaaacccgggagctgagaaacgact 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cggaggtcacgactccgggttcaaccacgtggtcacaaacccgggagctgagaaacgact 566
Query: 1040 gttccaggtcaaaggaaagaagaatattagggttagacaggtggatcctctcatctcgtc 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gttccaggtcaaaggaaagaagaatattagggttagacaggtggatcctctcatctcgtc 626
Query: 1100 gatgaacaaaggcgacgtcttcatactcgatgtggacaacagcatcctggtgtacgtggg 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gatgaacaaaggcgacgtcttcatactcgatgtggacaacagcatcctggtgtacgtggg 686
Query: 1160 cagttcagcgaagaatgtggagaagttgaaggcgatttccatagccaatcagataagaga 1219
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 687 cagttcagcgaagaatgtggagaagttgaaggcgatttccatagccaatcagatcagaga 746
Query: 1220 tcaggatcacaacggacgggggaaagttgatattattgaccaatattctagtgacgtaga 1279
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 747 tcaggatcacaacggacgggggaaagttgatattattgaccaatactctagtgacgtaga 806
Query: 1280 tgtcgacaaattctttacttcgctgggttctggatccaaaaatctggtgccagatgaaag 1339
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 807 tgtcgacaaattctttacttcgttgggatctggatccaaaaatctggtgccagatgaaag 866
Query: 1340 tgccggtggagatgatcag 1358
|||||||||||||||||||
Sbjct: 867 tgccggtggagatgatcag 885
Score = 115 bits (58), Expect = 2e-25
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1596 tcagacattcgagaaaaatgaagagcgatcagtcgttttgtcggaagtgtccgacagttc 1655
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 882 tcagacattcgagaaaaatgaagagcggtcagtcgttttgtcagaagtgtccgacagttc 941
Query: 1656 tgggaa 1661
||||||
Sbjct: 942 tgggaa 947
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 201,903
Number of extensions: 3986
Number of successful extensions: 3986
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3986
Number of HSP's successfully gapped: 2
Length of query: 1661
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1644
Effective length of database: 8,119,229
Effective search space: 13348012476
Effective search space used: 13348012476
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)