BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17953 (UTR included)
(2482 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2495_C1 1505 0.0
>BF14_2495_C1
Length = 900
Score = 1505 bits (759), Expect = 0.0
Identities = 774/779 (99%)
Strand = Plus / Plus
Query: 1704 gtataccttctggttaatggtaaacgggtaaagaagaagaagactaaccgcaaggaaatc 1763
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gtataccttctggttaatggaaaacgggtaaagaagaagaagaccaaccgcaaggaaatc 60
Query: 1764 aataaccccatatggaatgaagctttatcttttagtcttccttcaagtaacttacaagaa 1823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aataaccccatatggaatgaagctttatcttttagtcttccttcaagtaacttacaagaa 120
Query: 1824 gcttctattgaggtatgtgttgtaactggcggtggtagcggtctggtggtgggttggtgc 1883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcttctattgaggtatgtgttgtaactggcggtggtagcggtctggtggtgggttggtgc 180
Query: 1884 tgcgtgggagccgcagaaccagcggctgagggccgccactgggctcaaatggcgcaagag 1943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcgtgggagccgcagaaccagcggctgagggccgccactgggctcaaatggcgcaagag 240
Query: 1944 acacgaaaagccgtcgccatgtggcacaccctcagataaaccataggcaatcgatctacg 2003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acacgaaaagccgtcgccatgtggcacaccctcagataaaccataggcaatcgatctacg 300
Query: 2004 cacatctacggcacaacctatcctgctcgcacataaactgtcattttttaatctgtctaa 2063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cacatctacggcacaacctatcctgctcgcacataaactgtcattttttaatctgtctaa 360
Query: 2064 caactgtcaaacgtcagtctctcgtaactaaatagtctatgtgaatgtgtcttaaactac 2123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caactgtcaaacgtcagtctctcgtaactaaatagtctatgtgaatgtgtcttaaactac 420
Query: 2124 gtcttaatatattacccgatatggatacagtatttgtgaacccatgtatttagtattttt 2183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtcttaatatattacccgatatggatacagtatttgtgaacccatgtatttagtattttt 480
Query: 2184 taatgttttcataaaaatatatttcataacgccagagcctaaaataaacttatcctaaac 2243
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 481 taatgttttcataaaaatatatttcataacgccagagcctaaaataaatttatcctaaac 540
Query: 2244 tagatacttataacgaatttgttaaataatggccataaatcatatctttaaaataataaa 2303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tagatacttataacgaatttgttaaataatggccataaatcatatctttaaaataataaa 600
Query: 2304 tcaatataatattaatacctaccagttttaaactgattgttgttggtgtgatttaaattt 2363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcaatataatattaatacctaccagttttaaactgattgttgttggtgtgatttaaattt 660
Query: 2364 tacttaacctgcatacacttagatattatctgtactacatatttatttacggatagatta 2423
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tacttaacctacatacacgtagatattatctgtactacatatttatttacggatagatta 720
Query: 2424 tatagatttgattacgaacgcgtcgttgcgatcattctaattttgaatttgtattaact 2482
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tatagatttgattacgaacgcgtcgttgcgatcattctaattttgaatttgtattaact 779
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 279,618
Number of extensions: 6286
Number of successful extensions: 6286
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6286
Number of HSP's successfully gapped: 1
Length of query: 2482
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2465
Effective length of database: 8,119,229
Effective search space: 20013899485
Effective search space used: 20013899485
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)