BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17988 (UTR included)
(1312 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057A2G12 1550 0.0
>BF01057A2G12
Length = 830
Score = 1550 bits (782), Expect = 0.0
Identities = 812/822 (98%)
Strand = Plus / Plus
Query: 173 tgtgaatcaaatgtgcagtttgcagatgatattattcttcagttttactgagatacgaag 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tgtgaatcaaatgtgcagtttgcagatgatattattcttcagttttactgagatacgaag 68
Query: 233 caactactaatatcatcaaaaagaaggaataaatccatccttcaaaaagtgattgcacat 292
|||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 69 caactattaacatcatcaaaaagaaggaataaatccttccttcaaaaagtgatagcacat 128
Query: 293 attcaaagtatgctattttatataacgacatataaagtttacgaataaaatataacctcg 352
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 129 attcaaagtatgctattttatataacgacataaaaagtttacgaattaaatataacctcg 188
Query: 353 aatatttttaactttgaaatatataaacatggctaaatcgtcgacaagcaaagccggaaa 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aatatttttaactttgaaatatataaacatggctaaatcgtcgacaagcaaagccggaaa 248
Query: 413 accaaagaccaatgaagaaatttttgctggttttcaaaatcttcgtagtgaacaaaggca 472
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 249 accaaagaccaatgaagaaatttttgctggttttcaaaatcttcgtggtgaacaaaggca 308
Query: 473 actggcaaacaaaatttcagaacttgaaatggatctcaatgagcacaaaatagtgataga 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 actggcaaacaaaatttcagaacttgaaatggatctcaatgagcacaaaatagtgataga 368
Query: 533 aacactgaaaggtgtagaaagtggtcgaaaatgcttcagaatggtaggcggagtattagt 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aacactgaaaggtgtagaaagtggtcgaaaatgcttcagaatggtaggcggagtattagt 428
Query: 593 tgaaagaactgtagcagatgtactaccagaattagaaggaaataaagaacgactacctgc 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tgaaagaactgtagcagatgtactaccagaattagaaggaaataaagaacgactacctgc 488
Query: 653 tgcacttcaggcattacatgaacaactatctaaaaagggcatagagatcaatgagtatat 712
||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 489 tgctcttcaggcattacatgaacaactatctaaaaagggcacagagatcaatgagtatat 548
Query: 713 tgagaagcatgacatcaaggttcaacgtggaactgagagtgctgaagctccgcaagcaga 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tgagaagcatgacatcaaggttcaacgtggaactgagagtgctgaagctccgcaagcaga 608
Query: 773 cacaccggctaaatccaatgttctcgttgctagcagttaaatatgaaattaacaatttgt 832
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cacaccggctaaatccaatgtcctcgttgctagcagttaaatatgaaattaacaatttgt 668
Query: 833 ttacattaatcgctacatttggtatcttttacctcattatttaaattcatgttctctcat 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ttacattaatcgctacatttggtatcttttacctcattatttaaattcatgttctctcat 728
Query: 893 tgaaatttgtgtttatatccaaatatgagcttaatattcaaatgtttataaaaaaatatt 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tgaaatttgtgtttatatccaaatatgagcttaatattcaaatgtttataaaaaaatatt 788
Query: 953 taactattactaatagcattcaccatttgaaaaaactgctat 994
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 taactattactaatagcattcaccatttgaaaaaactgctat 830
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 229,578
Number of extensions: 5838
Number of successful extensions: 5838
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5838
Number of HSP's successfully gapped: 1
Length of query: 1312
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1295
Effective length of database: 8,119,229
Effective search space: 10514401555
Effective search space used: 10514401555
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)