BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18007 (UTR included)
(1257 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_185_C1 1047 0.0
>BF14_185_C1
Length = 1294
Score = 1047 bits (528), Expect = 0.0
Identities = 543/548 (99%)
Strand = Plus / Plus
Query: 476 aggaaggataaatcttttagccaaaatgccaataaagtcaatcaaggcacgtcaaatttt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 aggaaggataaatcttttagccaaaatgccaataaagtcaatcaaggcacgtcaaatttt 99
Query: 536 cgactcccgcggtaaccccacagtcgaagtcgatctcgtatcagacttaggtcttttccg 595
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 100 cgactcccgcggtaaccccacagtcgaagtcgatctcgtatcagacttaggccttttccg 159
Query: 596 cgctgctgtaccatctggagcatctactggtgtccatgaagctctagaactcagagacaa 655
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 tgctgctgtaccatctggagcatctactggtgtccatgaagctctagaactcagagacaa 219
Query: 656 tgtaaagggtgaatatcacggaaaaggtgtcctcacagccatcaagaacatcaattccat 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tgtaaagggtgaatatcacggaaaaggtgtcctcacagccatcaagaacatcaattccat 279
Query: 716 cattgctcctgaattattgaaacagaatttggaggtcacccaacaaaaagatattgatca 775
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 280 cattgctcctgaattattgaaacagaatttggaggtcacccaacaaaaagaaattgatca 339
Query: 776 atttatgctcggtttggatggtactgagaataagtccaaacttggtgccaatgcaatcct 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 atttatgctcggtttggatggtactgagaataagtccaaacttggtgccaatgcaatcct 399
Query: 836 cggggtttcgctagccgttgcaaaggctggtgcagctaagaagggtgtgcctctctacaa 895
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cggggtttcgttagccgttgcaaaggctggtgcagctaagaagggtgtgcctctctacaa 459
Query: 896 gcatctcgctgatttagctggcaataatgacattgttttgcccgtgcctgcctttaatgt 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gcatctcgctgatttagctggcaataatgacattgttttgcccgtgcctgcctttaatgt 519
Query: 956 tatcaatggcggatctcacgcaggaaataaactggccatgcaagagttcatgatcttgcc 1015
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 520 tatcaatggcggatctcacgcaggaaataaactggctatgcaagagttcatgatcttgcc 579
Query: 1016 aactggtg 1023
||||||||
Sbjct: 580 aactggtg 587
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 216 gtcaatcttcgatctgatacccttttaacaattctaagg 254
||||||||||||| |||||||||||||||||||||||||
Sbjct: 4 gtcaatcttcgatttgatacccttttaacaattctaagg 42
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 224,051
Number of extensions: 6447
Number of successful extensions: 6447
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6447
Number of HSP's successfully gapped: 2
Length of query: 1257
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1240
Effective length of database: 8,119,229
Effective search space: 10067843960
Effective search space used: 10067843960
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)