BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18011 (UTR included)
(1543 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A2A12 188 2e-47
BF01052B1H02 178 2e-44
BF01037B1H08 174 3e-43
BF01056B1D02 157 6e-38
BF01010B2F09 139 1e-32
BF01029B2F12 123 9e-28
BF01062A1B01 70 1e-11
>BF01023A2A12
Length = 723
Score = 188 bits (95), Expect = 2e-47
Identities = 125/135 (92%)
Strand = Plus / Plus
Query: 1409 gaaacctggcaagtaccaacgtgatctttcccgaatcatatgtactttcttagagtattt 1468
||||||||||||||||||| ||||||||| |||| ||| ||||||||||| | |||||||
Sbjct: 105 gaaacctggcaagtaccaatgtgatcttttccgagtcacatgtactttctaacagtattt 164
Query: 1469 agacgccactgacggacggtgaaggaaaacatcgtgaggaaacctggacttataatttca 1528
|||| ||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||
Sbjct: 165 agacaccactgacggacggtgaaggagaacgtcgtgaggaaacctggtcttataatttca 224
Query: 1529 aattataagtttgaa 1543
|||||||||||||||
Sbjct: 225 aattataagtttgaa 239
>BF01052B1H02
Length = 790
Score = 178 bits (90), Expect = 2e-44
Identities = 165/189 (87%), Gaps = 2/189 (1%)
Strand = Plus / Minus
Query: 1357 gtggcggcctggaggttaaaggtccgcctctcatacgtgagggtgcagtttcgaaacctg 1416
|||| ||||| ||||||||||| ||||||||| ||| ||||||||||| |||||| ||||
Sbjct: 560 gtggtggcctagaggttaaaggcccgcctctcgtacatgagggtgcaggttcgaatcctg 501
Query: 1417 gcaagtaccaacgtgatctttcc--cgaatcatatgtactttcttagagtatttagacgc 1474
| |||||| || ||||||||| ||||| ||||| ||||| | ||||||||||||| |
Sbjct: 500 ggaagtactaatgtgatctttttttcgaatgatatgcactttttaagagtatttagacac 441
Query: 1475 cactgacggacggtgaaggaaaacatcgtgaggaaacctggacttataatttcaaattat 1534
|||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||
Sbjct: 440 tactgacggacggtgaaggaaaacatcgtgaggaaacctggtcttataatttgaaataat 381
Query: 1535 aagtttgaa 1543
||||||||
Sbjct: 380 tagtttgaa 372
>BF01037B1H08
Length = 758
Score = 174 bits (88), Expect = 3e-43
Identities = 130/144 (90%)
Strand = Plus / Plus
Query: 1362 ggcctggaggttaaaggtccgcctctcatacgtgagggtgcagtttcgaaacctggcaag 1421
||||||||||||||||| ||||||||||||||||| || || | ||||||||||||||||
Sbjct: 79 ggcctggaggttaaaggcccgcctctcatacgtgaaggcgcgggttcgaaacctggcaag 138
Query: 1422 taccaacgtgatctttcccgaatcatatgtactttcttagagtatttagacgccactgac 1481
|||||| ||||||||| |||| ||||||||||||||| ||| ||||||| | ||||||||
Sbjct: 139 taccaatgtgatcttttccgagtcatatgtactttctaagaatatttagtcaccactgac 198
Query: 1482 ggacggtgaaggaaaacatcgtga 1505
||||||||| |||||||||||||
Sbjct: 199 ggacggtgagtgaaaacatcgtga 222
>BF01056B1D02
Length = 778
Score = 157 bits (79), Expect = 6e-38
Identities = 163/187 (87%), Gaps = 8/187 (4%)
Strand = Plus / Plus
Query: 1357 gtggcggcctggaggttaaaggtccgcctctcatacgtgagggtgcagtttcgaaacctg 1416
|||| ||||||||||||||||| ||||| ||| |||||||| || | || ||||||||
Sbjct: 462 gtggtggcctggaggttaaagg-ccgcccatca--cgtgagggcgcgggtt-gaaacctg 517
Query: 1417 gcaagtaccaacgtgatctttcccgaatcatatgtactttcttagagtatttagacgcca 1476
||||||||||| ||||||||| |||| ||||||||||||||| || ||| |||||| |||
Sbjct: 518 gcaagtaccaatgtgatcttttccgagtcatatgtactttctaagggtagttagacacca 577
Query: 1477 ctgacggacggtgaaggaaaacatcgtgaggaaacctggacttataatttcaaattataa 1536
|||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 578 ctgacg----gtgaaggaaaacgtcgtgaggaaacctggtcttataatttcaaattataa 633
Query: 1537 gtttgaa 1543
| |||||
Sbjct: 634 gattgaa 640
>BF01010B2F09
Length = 764
Score = 139 bits (70), Expect = 1e-32
Identities = 115/130 (88%)
Strand = Plus / Minus
Query: 1365 ctggaggttaaaggtccgcctctcatacgtgagggtgcagtttcgaaacctggcaagtac 1424
|||||||||||||| | |||||||| |||||| | || | ||||||||||| |||||||
Sbjct: 539 ctggaggttaaaggccagcctctcacacgtgaagtcgcgggttcgaaacctgacaagtac 480
Query: 1425 caacgtgatctttcccgaatcatatgtactttcttagagtatttagacgccactgacgga 1484
||| |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 479 caatgtgatcttcatcgagtcatatgtactttctaagagtatttagacgccactgacgga 420
Query: 1485 cggtgaagga 1494
||||||||||
Sbjct: 419 cggtgaagga 410
>BF01029B2F12
Length = 749
Score = 123 bits (62), Expect = 9e-28
Identities = 105/118 (88%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 1406 ttcgaaacctggcaagtaccaacgtgatctttcccgaatcatatgtactttcttagagta 1465
|||||||||||||||||||||| ||||| | | || |||||||||||||| ||||||
Sbjct: 659 ttcgaaacctggcaagtaccaatgtgatttatga-gagacatatgtactttctaagagta 601
Query: 1466 tttagacgccactgacggacggtgaaggaaaacatcgtgaggaaacctggacttataa 1523
||||||| |||||||||||||||||||||| |||||| |||||||||||| |||||||
Sbjct: 600 tttagacaccactgacggacggtgaaggaagacatcgcgaggaaacctggtcttataa 543
>BF01062A1B01
Length = 807
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 1487 gtgaaggaaaacatcgtgaggaaacctggacttataatttcaaattataagtttg 1541
||||||| |||||||| |||||||||||||||| |||||| |||||| |||||||
Sbjct: 230 gtgaagggaaacatcgcgaggaaacctggacttgtaatttaaaattagaagtttg 176
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 256,161
Number of extensions: 18111
Number of successful extensions: 18111
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 18109
Number of HSP's successfully gapped: 7
Length of query: 1543
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1526
Effective length of database: 8,119,229
Effective search space: 12389943454
Effective search space used: 12389943454
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)