BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18013 (UTR included)
(2566 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049A1B07 773 0.0
BF01037B1H08 135 4e-31
BF01056B1D02 109 2e-23
BF01023A2A12 109 2e-23
BF01010B2F09 88 8e-17
BF01029B2F12 76 3e-13
>BF01049A1B07
Length = 734
Score = 773 bits (390), Expect = 0.0
Identities = 396/399 (99%)
Strand = Plus / Plus
Query: 1112 gctcggtgagacccgtccatcatcattcggtccagccacgtaccaggatttcaaggagat 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gctcggtgagacccgtccatcatcattcggtccagccacgtaccaggatttcaaggagat 395
Query: 1172 cagatctcgctgtctctccgaaggcaggctgttcgaggatccggaattcccggccaccga 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cagatctcgctgtctctccgaaggcaggctgttcgaggatccggaattcccggccaccga 455
Query: 1232 tcgcagtttgtactacaaggaacgtctggatagacccttaacatggctaagacctgggga 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tcgcagtttgtactacaaggaacgtctggatagacccttaacatggctaagacctgggga 515
Query: 1292 aatcagcgaagatccgcagctattcgtggagggctacagtcgcttcgacgtgcaacaggg 1351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aatcagcgaagatccgcagctattcgtggagggctacagtcgcttcgacgtgcaacaggg 575
Query: 1352 cgagttaggagactgttggttgctggctgccgtcgccaatctgacgctccatagaaaact 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cgagttaggagactgttggttgctggctgccgtcgccaatctgacgctccatagaaaact 635
Query: 1412 cttcttccaagtagtgccggacgaccagagcttcgatgaagaatacgctggtgtcttcca 1471
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 636 cttcttccaagtagtgccggacgaccagagcttnnntgaagaatacgctggtgtcttcca 695
Query: 1472 cttccggttctggcagtatggtcgctgggtggacgttgt 1510
|||||||||||||||||||||||||||||||||||||||
Sbjct: 696 cttccggttctggcagtatggtcgctgggtggacgttgt 734
>BF01037B1H08
Length = 758
Score = 135 bits (68), Expect = 4e-31
Identities = 99/108 (91%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 1975 cagtggtatctatatactctcagaaagtacacatgactcggaaaagatcacattggtact 2034
||||||| ||| ||| ||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 196 cagtggtgactaaatattcttagaaagtacatatgactcggaaaagatcacattggtact 137
Query: 2035 tgccagg-ttcgaacccgcgccctcacgcatgagaggcgggcctttaa 2081
||||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 136 tgccaggtttcgaacccgcgccttcacgtatgagaggcgggcctttaa 89
>BF01056B1D02
Length = 778
Score = 109 bits (55), Expect = 2e-23
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 1975 cagtggtatctatatactctcagaaagtacacatgactcggaaaagatcacattggtact 2034
||||||| |||| ||| || |||||||||| ||||||||||||||||||||||||||||
Sbjct: 580 cagtggtgtctaactacccttagaaagtacatatgactcggaaaagatcacattggtact 521
Query: 2035 tgccaggttcgaacccgcgccctcacg 2061
||||||||| ||||||||||||||||
Sbjct: 520 tgccaggtttcaacccgcgccctcacg 494
>BF01023A2A12
Length = 723
Score = 109 bits (55), Expect = 2e-23
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 1975 cagtggtatctatatactctcagaaagtacacatgactcggaaaagatcacattggtact 2034
||||||| |||| ||||| | |||||||||| |||||||||||||||||||||||||||
Sbjct: 175 cagtggtgtctaaatactgttagaaagtacatgtgactcggaaaagatcacattggtact 116
Query: 2035 tgccaggttcgaacccgcgccctcacg 2061
||||||||| ||||||||||||||||
Sbjct: 115 tgccaggtttcaacccgcgccctcacg 89
>BF01010B2F09
Length = 764
Score = 87.7 bits (44), Expect = 8e-17
Identities = 87/100 (87%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 1983 tctatatactctcagaaagtacacatgactcggaaaagatcacattggtacttgccagg- 2041
|||| ||||||| |||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 433 tctaaatactcttagaaagtacatatgactcgatgaagatcacattggtacttgtcaggt 492
Query: 2042 ttcgaacccgcgccctcacgcatgagaggcgggcctttaa 2081
|||||||||||| | ||||| |||||||| |||||||||
Sbjct: 493 ttcgaacccgcgacttcacgtgtgagaggctggcctttaa 532
>BF01029B2F12
Length = 749
Score = 75.8 bits (38), Expect = 3e-13
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 1975 cagtggtatctatatactctcagaaagtacacatgactcggaaaagatcacattggtact 2034
||||||| |||| ||||||| |||||||||| ||| ||| | || ||||||||||||||
Sbjct: 587 cagtggtgtctaaatactcttagaaagtacatatgtctctcataa-atcacattggtact 645
Query: 2035 tgccagg-ttcgaacccgcgccctca 2059
||||||| ||||||||||||||||||
Sbjct: 646 tgccaggtttcgaacccgcgccctca 671
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 320,336
Number of extensions: 7572
Number of successful extensions: 7572
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 7569
Number of HSP's successfully gapped: 6
Length of query: 2566
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2549
Effective length of database: 8,119,229
Effective search space: 20695914721
Effective search space used: 20695914721
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)