BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18049 (UTR included)
(1486 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 170 4e-42
BF01044B2E12 107 5e-23
BF01012A1B09 101 3e-21
BF01049B2H03 100 1e-20
BF14_1695_C1 96 2e-19
BF01061B1E05 92 3e-18
BF14_23_C1 80 1e-14
BF01011A1H06 78 5e-14
BF01012A1E04 76 2e-13
BF01033B1B03 70 1e-11
BF01025B2E05 70 1e-11
BF14_3184_C1 70 1e-11
BF14_729_C2 68 4e-11
>BF14_729_C3
Length = 2041
Score = 170 bits (86), Expect = 4e-42
Identities = 92/94 (97%)
Strand = Plus / Minus
Query: 1142 atgagatctaagattttcgcgagtattcatttaaatgaaactagtattattcggatttac 1201
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 1729 atgagatctaagattttcgcgagtattcatttaaatgaagctagtattattcggatatac 1670
Query: 1202 tacgcggattttattatttaaaaactacataatc 1235
||||||||||||||||||||||||||||||||||
Sbjct: 1669 tacgcggattttattatttaaaaactacataatc 1636
>BF01044B2E12
Length = 823
Score = 107 bits (54), Expect = 5e-23
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 1169 catttaaatgaaactagtattattcggatttactacgcggattttattatttaaaaacta 1228
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 85 catttaaatgaaactagtatttttcggatttactacgcggattttattatttaannncta 26
Query: 1229 cataatc 1235
|||||||
Sbjct: 25 cataatc 19
>BF01012A1B09
Length = 841
Score = 101 bits (51), Expect = 3e-21
Identities = 86/97 (88%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 1142 atgagatctaagattttcgcgagt---attcatttaaatgaaactagtattattcggatt 1198
||||||||||||| | |||||||| ||||||||||||||||||| ||| |||||||
Sbjct: 705 atgagatctaagactgtcgcgagttttattcatttaaatgaaactaatatatttcggata 764
Query: 1199 tactacgcggattttattatttaaaaactacataatc 1235
||||||||||||||||||||| ||||||||||||||
Sbjct: 765 cactacgcggattttattattttaaaactacataatc 801
>BF01049B2H03
Length = 832
Score = 99.6 bits (50), Expect = 1e-20
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 1140 taatgagatctaagattttcgcgagtattcatttaaatgaaactagtattattcggattt 1199
||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||| ||
Sbjct: 354 taatgagatctaagattttagcgagtattcatttaaatgaaactaatatttttcgga-tt 296
Query: 1200 actacgcggattttatta 1217
|||| ||| |||||||||
Sbjct: 295 actaagcgtattttatta 278
>BF14_1695_C1
Length = 1407
Score = 95.6 bits (48), Expect = 2e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 1140 taatgagatctaagattttcgcgagtattcatttaaatgaaactagta 1187
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 taatgagatctaagattttcgcgagtattcatttaaatgaaactagta 1067
>BF01061B1E05
Length = 745
Score = 91.7 bits (46), Expect = 3e-18
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 1143 tgagatctaagattttcgcgagtattcatttaaatgaaactagtat 1188
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tgagatctaagattttcgcgagtattcatttaaatgaaactagtat 9
>BF14_23_C1
Length = 1573
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 1165 tattcatttaaatgaaactagtattattcggatttactacgcggattttattatttaaaa 1224
|||||||| ||||||||||||| ||| ||||| ||||||||| ||||||| |||||||
Sbjct: 455 tattcattcaaatgaaactagttttagtcggaaacactacgcggtttttattgtttaaaa 396
Query: 1225 actacataatcg 1236
||||||||||||
Sbjct: 395 actacataatcg 384
>BF01011A1H06
Length = 739
Score = 77.8 bits (39), Expect = 5e-14
Identities = 65/73 (89%), Gaps = 3/73 (4%)
Strand = Plus / Minus
Query: 1138 cttaatgagatctaagattttcgcgagt---attcatttaaatgaaactagtattattcg 1194
|||||||||||||||||||||||||| | ||||||||||||||| |||||||| ||||
Sbjct: 610 cttaatgagatctaagattttcgcgacttttattcatttaaatgaatctagtatttttcg 551
Query: 1195 gatttactacgcg 1207
||| ||||||||
Sbjct: 550 gataaactacgcg 538
>BF01012A1E04
Length = 841
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/76 (89%), Gaps = 4/76 (5%)
Strand = Plus / Minus
Query: 1143 tgagatctaagattttcgcgagt---attcatttaaatgaaactagtat-tattcggatt 1198
|||||||||||| |||||||||| ||||||||||||||||||| ||| | |||||||
Sbjct: 618 tgagatctaagactttcgcgagttttattcatttaaatgaaactaatatattttcggata 559
Query: 1199 tactacgcggatttta 1214
||||||||||||||||
Sbjct: 558 tactacgcggatttta 543
>BF01033B1B03
Length = 826
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 1145 agatctaagattttcgcgagtattcatttaaatgaaactagtattattcggatttactac 1204
||||||||||||||||||| ||| | || |||| |||||| |||| ||||||||||||||
Sbjct: 306 agatctaagattttcgcgaatatgcgttgaaataaaactaatatttttcggatttactac 247
Query: 1205 gcg 1207
|||
Sbjct: 246 gcg 244
>BF01025B2E05
Length = 759
Score = 69.9 bits (35), Expect = 1e-11
Identities = 49/53 (92%), Gaps = 3/53 (5%)
Strand = Plus / Minus
Query: 1139 ttaatgagatctaagattttcgcgagt---attcatttaaatgaaactagtat 1188
|||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 122 ttaatgagatctaagactttcgcgagttttattcatttaaatgaaactagtat 70
>BF14_3184_C1
Length = 1256
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1146 gatctaagattttcgcgagtattcatttaaatgaaacta 1184
||||||||||||||||||||| |||||||||||||||||
Sbjct: 14 gatctaagattttcgcgagtactcatttaaatgaaacta 52
>BF14_729_C2
Length = 1289
Score = 67.9 bits (34), Expect = 4e-11
Identities = 63/72 (87%), Gaps = 3/72 (4%)
Strand = Plus / Minus
Query: 1139 ttaatgagatctaagattttcgcgagtatt---catttaaatgaaactagtattattcgg 1195
|||||||||||||||| |||||| ||| || ||||||||||||||||| |||||||||
Sbjct: 677 ttaatgagatctaagactttcgccagttttaatcatttaaatgaaactagaattattcgg 618
Query: 1196 atttactacgcg 1207
|| ||||||||
Sbjct: 617 ataaactacgcg 606
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 217,710
Number of extensions: 5049
Number of successful extensions: 5049
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 5043
Number of HSP's successfully gapped: 13
Length of query: 1486
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1469
Effective length of database: 8,119,229
Effective search space: 11927147401
Effective search space used: 11927147401
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)