BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18059 (UTR included)
(1597 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009A1B03 1249 0.0
>BF01009A1B03
Length = 730
Score = 1249 bits (630), Expect = 0.0
Identities = 666/678 (98%), Gaps = 5/678 (0%)
Strand = Plus / Plus
Query: 227 ttatagttaccgattatgtcgtatattcttgtaacatgtcaataatagttgcttcgttat 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 ttatagttaccgattatgtcgtatattcttgtaacatgtcaataatagttgcttcgttat 112
Query: 287 atgtattgttcttagcattataagctacggttttttttgcaatgaatgaattttaaatgc 346
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 113 atgtattgttcttagcattataagctactgatttttttgcaatgaatgaattttaaatgc 172
Query: 347 tgaggaaagtgataataaaagtcttaaagctctaaac-----gaaataatggacaaaata 401
||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 173 tgaggaaagtgataataaaagtcttaaagctctaaactgaccgaaataatggacaaaatg 232
Query: 402 ataatttatatgacgaagggataaatgaaaatgttattatatgtttcatgcttggtttgt 461
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 233 ataatttatatgacgaagggataaatgaaaatgttattacatgtttcatgcttggtttgt 292
Query: 462 tattatagtttaaaagagtccatttacagtaggtttaagatgtggcatgccgctcttttg 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tattatagtttaaaagagtccatttacagtaggtttaagatgtggcatgccgctcttttg 352
Query: 522 cggtttatcaggcgacgattggttttaggaataatttttgcatcatcattgacctattgc 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cggtttatcaggcgacgattggttttaggaataatttttgcatcatcattgacctattgc 412
Query: 582 attgttagtttccttaaagagggtagcaataaaaatatggtgtatcaagatgtttctata 641
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 413 attgttagtttccttaaagagggtaacaataaaagtatggtgtatcaagatgtttctata 472
Query: 642 gaacataaaccatttgtgtggagaacacttcaagagcacaacgaaactcaagatactttg 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gaacataaaccatttgtgtggagaacacttcaagagcacaacgaaactcaagatactttg 532
Query: 702 tgtagaaactcaattcaaggaaagtctttacttgtggatgacagaggttatgtatgccaa 761
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 533 tgtagaaactcaattcaaggaaagtctttacttgtggatgaccgaggttatgtatgccaa 592
Query: 762 agaatggatttggctaagaatggctgttgtaacatagaagctaaacacactcagaggtat 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 agaatggatttggctaagaatggctgttgtaacatagaagctaaacacactcagaggtat 652
Query: 822 agctgtaaatcatgcaagaataacaactgttgtgttatatatgaatattgtgtgtcctgc 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 agctgtaaatcatgcaagaataacaactgttgtgttatatatgaatattgtgtgtcctgc 712
Query: 882 tgtcttgatcccagtaag 899
||||||||||||||||||
Sbjct: 713 tgtcttgatcccagtaag 730
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 262,857
Number of extensions: 6373
Number of successful extensions: 6373
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6372
Number of HSP's successfully gapped: 1
Length of query: 1597
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1580
Effective length of database: 8,119,229
Effective search space: 12828381820
Effective search space used: 12828381820
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)