BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18065 (UTR included)
(1480 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1329_C1 1628 0.0
>BF14_1329_C1
Length = 898
Score = 1628 bits (821), Expect = 0.0
Identities = 836/840 (99%), Gaps = 2/840 (0%)
Strand = Plus / Plus
Query: 493 ttcagacgatgtcgggtattgctagcgcacgtctagccgaagagagaaaagcttggcgca 552
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcaaacgatgtcgggtattgctagcgcacgtctagccgaagagagaaaagcttggcgca 120
Query: 553 aggaccatccatttggttttgtggccagaccaatgaagaatcctgatggttcattaaatc 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggaccatccatttggttttgtggccagaccaatgaagaatcctgatggttcattaaatc 180
Query: 613 taatgacatgggagtgtgcgatacccggaaaaaaggggacaccctgggaaggagggctgt 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taatgacatgggagtgtgcgatacccggaaaaaaggggacaccctgggaaggagggctgt 240
Query: 673 acaagttacgtatgatttttaaagatgattacccatcaagtccacctaaatgcaaatttg 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acaagttacgtatgatttttaaagatgattacccatcaagtccacctaaatgcaaatttg 300
Query: 733 agcctccattgttccaccccaatgtatatccatctggtactgtatgtttatcattgctgg 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcctccattgttccaccccaatgtatatccatctggtactgtatgtttatcattgctgg 360
Query: 793 atgaagaaaaagactggcgtccagcaatcacaatcaaacaaatcctccttggaattcaag 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgaagaaaaagactggcgtccagcaatcacaatcaaacaaatcctccttggaattcaag 420
Query: 853 atctacttaatgaaccaaatgttaaagatcctgcacaggctgaagcatacacaatctatt 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atctacttaatgaaccaaatgttaaagatcctgcacaggctgaagcatacacaatctatt 480
Query: 913 gccaaaatcgactagaatatgacaagagagtcagagcacaggcccgtgctatggctgcta 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gccaaaatcgactagaatatgacaagagagtcagagcacaggcccgtgctatggctgcta 540
Query: 973 cagagtaatggcattcatacattccttgatttattaggaatgaagggagaccattgttgt 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cagagtaatggcattcatacattccttgatttattaggaatgaagggagaccattgttgt 600
Query: 1033 gtcggtgggacggtgaaatatatcatttgtctttataaacatgcaagctggtatcaaatg 1092
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtcggtgggacggtgaa--atatcatttgtctttataaacatgcaagctggtatcaaatg 658
Query: 1093 aattttttccgttcaactgctacagctttggatcggaggagattaattttaagtagtgtt 1152
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 aatttttcccgttcaactgctacagctttggatcggaggagattaattttaagtagtgtt 718
Query: 1153 aaattatttacttaaatatgctgtttggtaaatattttaacaaattaatattatgaaaca 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 aaattatttacttaaatatgctgtttggtaaatattttaacaaattaatattatgaaaca 778
Query: 1213 aaacattcataaaaaataaatacttgaataccatttgtaagtactctaatgttaaaaatg 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 aaacattcataaaaaataaatacttgaataccatttgtaagtactctaatgttaaaaatg 838
Query: 1273 tagccattatggttaatttttaagacataatttatttgagacattatgcatttcactttt 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 tagccattatggttaatttttaagacataatttatttgagacattatgcatttcactttt 898
Score = 127 bits (64), Expect = 5e-29
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 363 gtgggacgctttgcttggcgctgttaaatttatttttcgatttgtttccttataatacat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtgggacgctttgcttggcgctgttaaatttatttttcgatttgtttccttataatacat 61
Query: 423 tcaa 426
||||
Sbjct: 62 tcaa 65
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 245,441
Number of extensions: 5263
Number of successful extensions: 5263
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5262
Number of HSP's successfully gapped: 2
Length of query: 1480
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1463
Effective length of database: 8,119,229
Effective search space: 11878432027
Effective search space used: 11878432027
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)