BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18080 (UTR included)
(1945 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3087_C1 751 0.0
BF14_3261_C1 135 3e-31
>BF14_3087_C1
Length = 773
Score = 751 bits (379), Expect = 0.0
Identities = 387/391 (98%)
Strand = Plus / Plus
Query: 520 ccacggcgtctctaaaaccagaagagtcgaaacgttctgaaacagacagtcggttcaaga 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ccacggcgtctctaaaaccagaagagtcgaaacgttctgaaacagacagtcggttcaaga 442
Query: 580 tgcctgcagcaagctttggttctctttcattacctggaactggtgactgtggaattaaag 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgcctgcagcaagctttggttctctttcattacctggaactggtgactgtggaattaaag 502
Query: 640 atgtctggaatcacaaccttcatgaagagtttgcaataattagacaagttgttcaaaagt 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atgtctggaatcacaaccttcatgaagagtttgcaataattagacaagttgttcaaaagt 562
Query: 700 atcattgggttgcaatggacactgagtttcctggagtagtagccagacctattggggagt 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atcattgggttgcaatggacactgagtttcctggagtagtagccagacctattggggagt 622
Query: 760 ttcgctctactgctgactaccaataccaacttctcaggtgcaatgttgatttactgagga 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttcgctctactgctgactaccaataccaacttctcaggtgcaatgttgatttactgagga 682
Query: 820 taattcaattgggtcttacattcatggatgaaaatggaaaaacacccccaggttatacaa 879
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 683 taattcaattgggtcttacattcatggatnnnnatggaaaaacacccccaggttatacaa 742
Query: 880 catggcagttcaatttcaaatttaacctaca 910
|||||||||||||||||||||||||||||||
Sbjct: 743 catggcagttcaatttcaaatttaacctaca 773
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 485 cacatgacctgtcaccatggcatgtgttgagttga 519
|||||||||||||||||||||||||||||||||||
Sbjct: 1 cacatgacctgtcaccatggcatgtgttgagttga 35
>BF14_3261_C1
Length = 805
Score = 135 bits (68), Expect = 3e-31
Identities = 185/224 (82%)
Strand = Plus / Plus
Query: 678 attagacaagttgttcaaaagtatcattgggttgcaatggacactgagtttcctggagta 737
|||||||| |||| || |||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 274 attagacagattgtacagaagtatcaatgggttgcaatggacacagagtttccaggagta 333
Query: 738 gtagccagacctattggggagtttcgctctactgctgactaccaataccaacttctcagg 797
|| || || || || || || ||||| |||||||| ||||||||||| |||||| | ||
Sbjct: 334 gttgctaggccgataggtgaatttcgttctactgcggactaccaatatcaacttttaaga 393
Query: 798 tgcaatgttgatttactgaggataattcaattgggtcttacattcatggatgaaaatgga 857
|||||||| ||| | ||| | ||||| ||||| || ||||| || ||||||||||||||
Sbjct: 394 tgcaatgtagatctcctgcgaataatacaattaggacttacttttatggatgaaaatggt 453
Query: 858 aaaacacccccaggttatacaacatggcagttcaatttcaaatt 901
||||| || ||||||| || |||||||| || ||||| |||||
Sbjct: 454 aaaacgcctccaggttgcactacatggcaatttaattttaaatt 497
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 336,204
Number of extensions: 18112
Number of successful extensions: 18112
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 18111
Number of HSP's successfully gapped: 3
Length of query: 1945
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1928
Effective length of database: 8,119,229
Effective search space: 15653873512
Effective search space used: 15653873512
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)