BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18087 (UTR included)
(4621 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005B1A11 1291 0.0
BF01010B2D05 961 0.0
BF01005A2E08 809 0.0
>BF01005B1A11
Length = 667
Score = 1291 bits (651), Expect = 0.0
Identities = 663/667 (99%)
Strand = Plus / Plus
Query: 1814 gcaggagggtcttataagtgggattgttaggtccactagaaagttcttagtccatagaga 1873
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaggagggtcttataagtggtattgttaggtccactagaaagttcttagtccatagaga 60
Query: 1874 tgttaccttacaagtagcgtccctggtgacaataggatgtgtcctgtcagttgatcccaa 1933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttaccttacaagtagcgtccctggtgacaataggatgtgtcctgtcagttgatcccaa 120
Query: 1934 agtagaggaaatattgcaggccatggaaaaggaccaagtatgtaataagtcgcaacaaaa 1993
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 121 agtagaggaaatattgcaggccatggaaaaggaccaagtatctaataagtcgcaacaaaa 180
Query: 1994 tatattgaataaggaaaatgtgtctttgaacgatgaatgcgatgatttcgaggagggtta 2053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatattgaataaggaaaatgtgtctttgaacgatgaatgcgatgatttcgaggagggtta 240
Query: 2054 ctctgacgatgaaatgtttaccgcagaaacggtgaacgataagagtgaggaagtggataa 2113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctctgacgatgaaatgtttaccgcagaaacggtgaacgataagagtgaggaagtggataa 300
Query: 2114 gtatttgttcaagagttggattctggatatctgttttaaaaatatgggatggctgttcag 2173
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtatttgtttaagagttggattctggatatctgttttaaaaatatgggatggctgttcag 360
Query: 2174 gagcaatgagattgttagatgcaagccgtcaacgatacctgttattctagaatccttgca 2233
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 361 gagcaatgagattgttagatgcaagccgtcaacgatacctgttattctggaatccttgca 420
Query: 2234 agtcctatcagcgatagcgttccatcacctggcagatttcctctcctcccacataatgtt 2293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agtcctatcagcgatagcgttccatcacctggcagatttcctctcctcccacataatgtt 480
Query: 2294 acttggtgatatattgaaagagatgttgaaacacgaacaccaagacgtcgtgctgcaggc 2353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acttggtgatatattgaaagagatgttgaaacacgaacaccaagacgtcgtgctgcaggc 540
Query: 2354 tgcgaggactataagtataattggagacgcgctacagaaactagaacagcaagatctatc 2413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgcgaggactataagtataattggagacgcgctacagaaactagaacagcaagatctatc 600
Query: 2414 cccaccgctgagtcactgtgtgtacatgtgggagactctgctgacgcctctatcgttagt 2473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cccaccgctgagtcactgtgtgtacatgtgggagactctgctgacgcctctatcgttagt 660
Query: 2474 actacag 2480
|||||||
Sbjct: 661 actacag 667
>BF01010B2D05
Length = 703
Score = 961 bits (485), Expect = 0.0
Identities = 503/509 (98%)
Strand = Plus / Plus
Query: 388 tgctctaatatataaacttttaacatttactaactggtagcagttagaaaaagttaaaaa 447
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 13 tgctctaatatataaacttttaacatttactaactggtagcagttggaaaaagttaaaaa 72
Query: 448 gaattcaaatatacaaataacttcaacccaatatcaataaacctaatggcaaaatgaatg 507
||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 73 gaatttaaatatacaaataacttcaacacaacatcaataaacctaatggcaaaatgaatg 132
Query: 508 tcttcgagcaattctcacaactctcggaagaactatgtagtcatctatatttaaaagagt 567
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 133 tcttcgagcaattctcacaactctcggaagaactctgtagtcatctatatttaaaagagt 192
Query: 568 atgataaaagcgacataaatgctttaatagatgaacttaatgcgaagccttataattcaa 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atgataaaagcgacataaatgctttaatagatgaacttaatgcgaagccttataattcaa 252
Query: 628 atttatttgtccgcaaagaggatgccgctgccctggtgacctcattatgtttcaatatca 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atttatttgtccgcaaagaggatgccgctgccctggtgacctcattatgtttcaatatca 312
Query: 688 aacctgttgatgaatttctgtcaactaagacatcacatttgataaacagtctagtcacca 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aacctgttgatgaatttctgtcaactaagacatcacatttgataaacagtctagtcacca 372
Query: 748 aacaaagtcttaaatttggctatgatttcttatttaaagtagtagcttggcatattgaat 807
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aacaaagccttaaatttggctatgatttcttatttaaagtagtagcttggcatattgaat 432
Query: 808 gcataaaaacatgttcagatatcatattacctgatattcttcataacctccagtgcatat 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gcataaaaacatgttcagatatcatattacctgatattcttcataacctccagtgcatat 492
Query: 868 tgcaaacaaacccacaaagtggtagtaag 896
|||||||||||||||||||||||||||||
Sbjct: 493 tgcaaacaaacccacaaagtggtagtaag 521
>BF01005A2E08
Length = 548
Score = 809 bits (408), Expect = 0.0
Identities = 514/548 (93%), Gaps = 1/548 (0%)
Strand = Plus / Minus
Query: 4021 tggaagccgctaaatatgtaacggtcgaattagttccagagaatgatacacagtcccaga 4080
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tggaagccgctaaatatgtaacggtcgaattagttccagagaatgatacacagtcccagg 489
Query: 4081 ccgtcggaatgttacaggaattatttatttgggatgtttaaatataattaagataagttt 4140
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 488 ccgtcggaatgttacaggaattatttttttgggatgtttaaatataattaacataagttt 429
Query: 4141 tatatttatattcaagagattttttttaagggtaccttgttttttcaactaccttcataa 4200
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 428 tatatttatattcaagagattttttttaagggtcccttgttttttcaactcccttcataa 369
Query: 4201 taaaaaaaa-cgtaggataaaaaaataacaagaaatgttaaatgtattttatatgtgaat 4259
||||||||| ||| ||||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 368 taaaaaaaaacgtgggataaaaaaataccaagaaatgttaaatgttttttatatgggaat 309
Query: 4260 tatgtgtttaaaaaaatatatttgttttaattttaatttattttataactaacaagatct 4319
|||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 308 tatgggtttaaaaaaaaaaatttgttttaattttaatttattttataactaacaagattt 249
Query: 4320 ctgtcataagtcgcagataataaatattttatttttttcattgtatattaaacgtttaaa 4379
||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 248 ttgttgtaagtcgcagataataaaaattttatttttttcattgtatattaaacgtttaaa 189
Query: 4380 tttttacttggctgtcgtaaccattaaacgtaaacgttttacttataaaacataattcaa 4439
||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 188 tttttacttggctgttgtaaccattaaacgtgaacgttttacttttaaaacataattcaa 129
Query: 4440 agcaaatatacgacctctttttttggaaaattgtatataataagcgaatgagcgataact 4499
||||||| |||| |||| |||||||||||||||||| | ||||| || | || |||||
Sbjct: 128 agcaaatttacgccctcattttttggaaaattgtattttataagggattagccggtaact 69
Query: 4500 tataatttattatccaatgtaatgaatggattttgtttggttgcttaattatattaagtg 4559
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 68 tataatttattttccaatgtaatgaatggattttgtttggttgcttaattatattaaggg 9
Query: 4560 gcaagaat 4567
||||||||
Sbjct: 8 gcaagaat 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 575,499
Number of extensions: 16363
Number of successful extensions: 16363
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 16361
Number of HSP's successfully gapped: 3
Length of query: 4621
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4603
Effective length of database: 8,109,745
Effective search space: 37329156235
Effective search space used: 37329156235
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)