BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18094 (UTR included)
(1447 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062A1F12 1516 0.0
>BF01062A1F12
Length = 837
Score = 1516 bits (765), Expect = 0.0
Identities = 820/838 (97%), Gaps = 1/838 (0%)
Strand = Plus / Plus
Query: 324 gtctgatgaaacatttcggagttcgattagcaatcgtgacaataaattagaatttagcaa 383
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctgatgaaatatttcggagttcgattagcaatcgtgacaataaattagaatttagcaa 60
Query: 384 tgaatattagcagttaacatagtgcgtttgcttcataatcattaattgagtgatcaatat 443
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 61 tgaatattagcagttaacatagtgcgtttgcttcataataattaattgagtgatcaatat 120
Query: 444 ttttattaaatataataaaaaaaggattttatttaaatattcttttataaaactacaatg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttttattaaatataataaaaaaaggattttatttaaatattcttttataaaactacaatg 180
Query: 504 tctttatcacagttgcctttatttttaaaaggtcaagtagtaaacgggttcggaagaggt 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctttatcacagttgcctttatttttaaaaggtcaagtagtaaacgggttcggaagaggt 240
Query: 564 tcaaaggacttaggttgtccgaccgcaaattttccgagggaagtggcacagtctctgcca 623
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 241 tcaaaggacttaggttgtccgaccgcaaattttccaagggaagtggcacagtctctgcca 300
Query: 624 aaagatttaaaaactggtgtgtattatggttgggctaaagttgactcgggtcccgtttac 683
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 301 aaagatttaaaaactggtgtgtattatggttgggctaaagttgactcgggacctgtttac 360
Query: 684 aagatggttgtcaacattggatggtgcccgttttatcagaataaagagttgtctgtggaa 743
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagatggtcgtcaacattggatggtgcccgttttatcagaataaagagttgtctgtggaa 420
Query: 744 actcatgttattcataacttcgacgacgacttttatggttcgatcttgaagatctgtgtg 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 actcatgttattcataacttcgacgacgacttttatggttcgatcttgaagatctgtgtg 480
Query: 804 ctgggatacttgagacctgaaaagaactttccgtcgctgaataatctgataagtgctata 863
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 481 ctgggatacttgagacctgaaaagaactttccgtcgctgaacaatctgataagtgctata 540
Query: 864 aaacaggatattgaagacgctaagcaaaatttggacatcaaagaaaatataatatttaaa 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaacaggatattgaagacgctaagcaaaatttggacatcaaagaaaatataatatttaaa 600
Query: 924 gaacatgacttttttaaaaattaattaggtttgctttgactaatattttttattaagcaa 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaacatgacttttttaaaaattaattaggtttgctttgactaatattttttattaagcaa 660
Query: 984 tactttagtaaaattcttgtatggccgtatggaagtacactttcattattagtactttca 1043
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 661 tactttagtaaaattcttgtatggccgtatggaagtacactttcattattagtattttca 720
Query: 1044 acaaaatctatcaaggtatacgtttttgttgattgatcgctactaaatataatgttgtca 1103
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 721 acaaaatctatcaaggtatacgtttttgttgattgatcgctactaaatat-tcatagtca 779
Query: 1104 ttaaatttacgatctttaactaattctcgagtgcatctgtcagtgtcagctacaaagt 1161
| || ||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 780 tnnaanttacgatttttaactaattctcgagtgcatctgtcagtgtcagttacaaagt 837
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 251,648
Number of extensions: 6551
Number of successful extensions: 6551
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6551
Number of HSP's successfully gapped: 2
Length of query: 1447
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1430
Effective length of database: 8,119,229
Effective search space: 11610497470
Effective search space used: 11610497470
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)