BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18107 (UTR included)
(2038 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039B2F12 1166 0.0
>BF01039B2F12
Length = 616
Score = 1166 bits (588), Expect = 0.0
Identities = 606/612 (99%)
Strand = Plus / Plus
Query: 173 aaaattaaacatggtgtgtacagatagatcgtctcaaaccgaaataatgagatccccagc 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 aaaattaaacatggtgtgtacagatagatcgtctcaaaccgaaataatgagatccccagc 64
Query: 233 aaatgatcactttaaattcaaaatgcttttagatagatgtaaaacagtggtaatattttc 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 aaatgatcactttaaattcaaaatgcttttagatagatgtaaaacagtggtaatattttc 124
Query: 293 aagtttaatttgcacttttgctgtattgatatcacttcacaagctgttaagtcacgaagt 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aagtttaatttgcacttttgctgtattgatatcacttcacaagctgttaagtcacgaagt 184
Query: 353 gaggctccctcggcccttttcgcctatacctgccggtttatatggaaactatctcgagac 412
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gaggctccctcggcccttttcacctatacctgccggtttatatggaaactatctcgagac 244
Query: 413 attcgtcgccgagtccccaccagtcatcaaaaaacaagataaagctagcgatgctgaagc 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 attcgtcgccgagtccccaccagtcatcaaaaaacaagataaagctagcgatgctgaagc 304
Query: 473 cgtggtgtccttaaacgcagcacttgaaatgaaaaaaattggtaaagctgataaagcact 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cgtggtgtccttaaacgcagcacttgaaatgaaaaaaattggtaaagctgataaagcact 364
Query: 533 aaaactttttcaacacgcatttgcgctgtcgccaaaacatgcggacatattgaaccacta 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aaaactttttcaacacgcatttgcgctgtcgccaaaacatgcggacatattgaaccacta 424
Query: 593 cggagagttcttagaagatactaagaaagatgtcgttaaggcagatcagctatatacatt 652
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 425 cggagagttcttagaagatactaagaaggatgtcgttaaggcagatcaactatatacatt 484
Query: 653 agctttatccaactatccggatcacacaggtgcaatggtaaatagacaacgcacagcaag 712
||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 agcattgtccaattatccggatcacacaggtgcaatggtaaatagacaacgcacagcaag 544
Query: 713 tattgttgagaatttagatagagaaatgttaagaaagatagacgagaaaagagatgcttt 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tattgttgagaatttagatagagaaatgttaagaaagatagacgagaaaagagatgcttt 604
Query: 773 attgtctattcc 784
||||||||||||
Sbjct: 605 attgtctattcc 616
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 216,259
Number of extensions: 3823
Number of successful extensions: 3823
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3823
Number of HSP's successfully gapped: 1
Length of query: 2038
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2021
Effective length of database: 8,119,229
Effective search space: 16408961809
Effective search space used: 16408961809
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)