BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18145 (UTR included)
(2491 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044A1D01 76 3e-13
BF01046A1H05 70 2e-11
BF01040A1G09 70 2e-11
BF01033A1F05 70 2e-11
BF01044A1E01 70 2e-11
BF01022A2F11 68 7e-11
BF01010B1B03 68 7e-11
>BF01044A1D01
Length = 742
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 79 atatatatttatatatatatatatatatatatacatatacgtatatttattaat 132
|||||||| |||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 15 atatatatatatatatatatatatatatatatatatatatatatatttattaat 68
>BF01046A1H05
Length = 918
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 79 atatatatttatatatatatatatatatatatacatatacgtatatt 125
|||||||| |||||||||||||||||||||||| ||||| |||||||
Sbjct: 852 atatatatatatatatatatatatatatatatatatatatgtatatt 806
>BF01040A1G09
Length = 753
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 79 atatatatttatatatatatatatatatatatacatata 117
|||||||| ||||||||||||||||||||||||||||||
Sbjct: 630 atatatatatatatatatatatatatatatatacatata 592
Score = 67.9 bits (34), Expect = 7e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 79 atatatatttatatatatatatatatatatatacatatacgtatat 124
|||||||| |||||||||||||||||||||||| |||||| |||||
Sbjct: 636 atatatatatatatatatatatatatatatatatatatacatatat 591
>BF01033A1F05
Length = 770
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 79 atatatatttatatatatatatatatatatatacatata 117
|||||||| ||||||||||||||||||||||||||||||
Sbjct: 539 atatatatatatatatatatatatatatatatacatata 501
Score = 67.9 bits (34), Expect = 7e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 79 atatatatttatatatatatatatatatatatacatatacgtatat 124
|||||||| |||||||||||||||||||||||| |||||| |||||
Sbjct: 545 atatatatatatatatatatatatatatatatatatatacatatat 500
>BF01044A1E01
Length = 454
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 71 tataatgaatatatatttatatatatatatatatatatatacatata 117
|||||| ||||||||| |||||||||||||||||||||||| |||||
Sbjct: 292 tataatcaatatatatatatatatatatatatatatatatatatata 338
>BF01022A2F11
Length = 738
Score = 67.9 bits (34), Expect = 7e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 79 atatatatttatatatatatatatatatatatac 112
||||||||||||||||||||||||||||||||||
Sbjct: 372 atatatatttatatatatatatatatatatatac 405
>BF01010B1B03
Length = 305
Score = 67.9 bits (34), Expect = 7e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 79 atatatatttatatatatatatatatatatatacatatacgtatatttattaat 132
|||||||| |||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct: 178 atatatatatatatatatatatatatatatatatatatatatatatatattaat 125
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 435,712
Number of extensions: 20067
Number of successful extensions: 20067
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 19982
Number of HSP's successfully gapped: 11
Length of query: 2491
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2474
Effective length of database: 8,119,229
Effective search space: 20086972546
Effective search space used: 20086972546
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)