BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18162 (UTR included)
(3160 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044B2H10 979 0.0
>BF01044B2H10
Length = 766
Score = 979 bits (494), Expect = 0.0
Identities = 506/510 (99%)
Strand = Plus / Plus
Query: 2651 ttacatgtagcgaattgtgccgaagattactattgaataaatatttttaaaagtagaacc 2710
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 34 ttacatgtagcgaattgtgccgaagattactattgaataaatattttttaaagtagaacc 93
Query: 2711 gtggcgttgtattagtgccatacttgtatgtataagaatgatcatgtatattttatgcac 2770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 gtggcgttgtattagtgccatacttgtatgtataagaatgatcatgtatattttatgcac 153
Query: 2771 acttttccttcttattgtcactgtaccgtttgatacagtgacctttgcttgtatttgtgt 2830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 acttttccttcttattgtcactgtaccgtttgatacagtgacctttgcttgtatttgtgt 213
Query: 2831 taaagttgactgctgtaatgttaagttattgtatttagatattttaatgtgttatttatt 2890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 taaagttgactgctgtaatgttaagttattgtatttagatattttaatgtgttatttatt 273
Query: 2891 tgtagctttatggatcgctttaactatgataaagagatatgtttatatgatacagtattt 2950
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tgtagctttatgaatcgctttaactatgataaagagatatgtttatatgatacagtattt 333
Query: 2951 ctcaatgagacgggttggattatattacttttagcgtttaaattttttgatgttattttt 3010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctcaatgagacgggttggattatattacttttagcgtttaaattttttgatgttattttt 393
Query: 3011 tggttgaactgtgttgttatgtagtagtggatcgctagcgttcctgtgttcatcacatta 3070
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 394 tggttgaactgtgttgttatgtagtagtggagcgcttgcgttcctgtgttcatcacatta 453
Query: 3071 tcatgtttagaagacttagattgcttagtataggtatagacttacatccacattccatat 3130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tcatgtttagaagacttagattgcttagtataggtatagacttacatccacattccatat 513
Query: 3131 acagatttcatctccatcgcataactcaaa 3160
||||||||||||||||||||||||||||||
Sbjct: 514 acagatttcatctccatcgcataactcaaa 543
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 281,804
Number of extensions: 4662
Number of successful extensions: 4662
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4662
Number of HSP's successfully gapped: 1
Length of query: 3160
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3142
Effective length of database: 8,109,745
Effective search space: 25480818790
Effective search space used: 25480818790
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)