BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18185 (UTR included)
(1336 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_833_C1 1659 0.0
>BF14_833_C1
Length = 1060
Score = 1659 bits (837), Expect = 0.0
Identities = 855/861 (99%)
Strand = Plus / Plus
Query: 476 agaaagtagttttttgattacgaccatggcagatcctcgaattcgtcaaataaagattaa 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agaaagtagttttttgattacgaccatggcagatcctcgaattcgtcaaataaagattaa 61
Query: 536 aacgggtgtcgtaaagaggattgctaaagaaaaagtagtttacgagaaggaggccgagca 595
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 62 aacgggtgtcgtaaagaggattgctaaagaaaaagtagtttacgagaaagaggccgagca 121
Query: 596 acaaaagaatagaatagagaagttaaaagctgaaggacaagacgagcataccataagaaa 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 acaaaagaatagaatagagaagttaaaagctgaaggacaagacgagcataccataagaaa 181
Query: 656 acaagaggaggttttacaggagtcgcttatgatggtccctgactgccagagaagactggc 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 acaagaggaggttttacaggagtcgcttatgatggtccctgactgccagagaagactggc 241
Query: 716 gaaagcatttgcggatctaaaaagcactctcgaaacagaacaagatctaaaagaaagcga 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gaaagcatttgcggatctaaaaagcactctcgaaacagaacaagatctaaaagaaagcga 301
Query: 776 agattacgcagccgctgagcaagtattaaaggacgcggagtgccaactctccacaacata 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agattacgcagccgctgagcaagtattaaaggacgcggagtgccaactctccacaacata 361
Query: 836 actatattaactcttccttttatattagttttaacccttatacaaatcatgtcttataat 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 actatattaactcttccttttatattagttttaacccttatacaaatcatgtcttataat 421
Query: 896 cgcttttacacaaattaccaagggggcaatgttgcattccatgacttccgataccctcca 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cgcttttacacaaattaccaagggggcaatgttgcattccatgacttccgataccctcca 481
Query: 956 ccagttcaccccgtggccttcaccaaagaaatatctgatgaggagtttatcaagaatttt 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ccagttcaccccgtggccttcaccaaagaaatatctgatgaggagtttatcaagaatttt 541
Query: 1016 gaatcattcattccacaagctccagcaagaaaaaaattctcagccactaaaatatatcca 1075
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 542 gaatcattcattccacaagctccagcaagaaaaaaattctcagctactaaaatatatcca 601
Query: 1076 ataaaagaaaaattgatatcattagtttctttgtacaacgacattcaggaagaagagaag 1135
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ataaaagaaaaattgatattattagtttctttgtacaacgacattcaggaagaagagaag 661
Query: 1136 aagttgtcagaaagtgtaacagaactgaccgacaatgaatggcagtcggcatttgatagc 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aagttgtcagaaagtgtaacagaactgaccgacaatgaatggcagtcggcatttgatagc 721
Query: 1196 ataataaataaaaagaatgaaattaaagaccacatcagtgcattatacagctctcagctt 1255
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ataatgaataaaaagaatgaaattaaagaccacatcagtgcattatacagctctcagctt 781
Query: 1256 gatctaggaaagaaactcatagccaagagattagcaaaacggcttcgcttaaagagattc 1315
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 782 gatctaggaaagaaactcatagccaagagattagcgaaacggcttcgcttaaagagactc 841
Query: 1316 aaacaagaaagaaaaaaggag 1336
|||||||||||||||||||||
Sbjct: 842 aaacaagaaagaaaaaaggag 862
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 205,595
Number of extensions: 4925
Number of successful extensions: 4925
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4925
Number of HSP's successfully gapped: 1
Length of query: 1336
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1319
Effective length of database: 8,119,229
Effective search space: 10709263051
Effective search space used: 10709263051
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)