BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18212 (UTR included)
(3751 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01007X1F12 1520 0.0
>BF01007X1F12
Length = 801
Score = 1520 bits (767), Expect = 0.0
Identities = 791/799 (98%)
Strand = Plus / Plus
Query: 1825 caaaccctctcatatacaaaattattaataaaaaacaatcaatacctaatcactatgcaa 1884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaaccctctcatatacaaaattattaataaaaaacaatcaatacctaatcactatgcaa 60
Query: 1885 ataaacttgtatcagaagggattctaactggagatgaagtcgagagcataacaacagaat 1944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataaacttgtatcagaagggattctaactggagatgaagtcgagagcataacaacagaat 120
Query: 1945 tcactaaatatttgcaatcgcaattcgaacaacataattcctacaaacccgagggatcat 2004
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 tcactaaatatttgcaatcgcaattcgaacaacataattcctacaaacccgaggtatcat 180
Query: 2005 attaccaagatcagtggtcagaaatgagtgctgcacctcgagctgtggaactctgggata 2064
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 181 attaccaagatcaatggtcagaaatgagtgctgcacctcgagctgtagaactctgggata 240
Query: 2065 ctggcgttgacactgaaatcttgaagcaggtcggacgagcctccgtcattgtacctgatg 2124
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctggcgtcgacactgaaatcttgaagcaggtcggacgagcctccgtcattgtacctgatg 300
Query: 2125 actttgtcatacatccccatttggcgaaaacccatgtaaaaaatcgattgaacaaattgt 2184
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 301 actttgtcatacatccccatttggcgaaaacccatgtaaaaaatcgattaaacaaattgt 360
Query: 2185 ccgaggaaaaaggactcgactgggctacagcggaggctctcgcttttggatcattactaa 2244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccgaggaaaaaggactcgactgggctacagcggaggctctcgcttttggatcattactaa 420
Query: 2245 tggaaggcaggaacgttcgcatcagtggagaagatgttggtagaggtaccttcgcccaca 2304
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggaaggccggaacgttcgcatcagtggagaagatgttggtagaggtaccttcgcccaca 480
Query: 2305 ggcatgttatgttcgtagaccaggagaaagagaatatacacatcccactgaaccatatac 2364
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 481 ggcatgttatgttcgtagaccaggagaacgagaatatacacatcccactgaaccatatac 540
Query: 2365 acaaggaacagaaagcgtttttagaggtggcaaattcaattctatctgaggaagccgtgt 2424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acaaggaacagaaagcgtttttagaggtggcaaattcaattctatctgaggaagccgtgt 600
Query: 2425 tgggattcgaatacggcatggcattcgattcgcccgaaaatctttgtttatgggaagcac 2484
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 601 tgggattcgaatacggcatggcattcgattcgcccgaaaacctttgtttatgggaagcac 660
Query: 2485 agttcggcgatttttacacgggagcacagattatagtcgataatttcattgcttctggcg 2544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agttcggcgatttttacacgggagcacagattatagtcgataatttcattgcttctggcg 720
Query: 2545 aatcgaaatgggttcgcagcaacggtctagtgatgttgcttccacacggattcgatggcg 2604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aatcgaaatgggttcgcagcaacggtctagtgatgttgcttccacacggattcgatggcg 780
Query: 2605 cagcatccgaacattcctc 2623
|||||||||||||||||||
Sbjct: 781 cagcatccgaacattcctc 799
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 421,600
Number of extensions: 9052
Number of successful extensions: 9052
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9052
Number of HSP's successfully gapped: 1
Length of query: 3751
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3733
Effective length of database: 8,109,745
Effective search space: 30273678085
Effective search space used: 30273678085
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)