BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18224 (UTR included)
(3262 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040A2B07 1185 0.0
BF01030A1D08 1154 0.0
BF01037B1H08 82 6e-15
BF01056B1D02 76 4e-13
BF01023A2A12 68 1e-10
>BF01040A2B07
Length = 721
Score = 1185 bits (598), Expect = 0.0
Identities = 646/662 (97%)
Strand = Plus / Plus
Query: 1607 cgtcttatcccggggacggagctacaaggaggcggcgcggctggccgaggtcggaactga 1666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 cgtcttatcccggggacggagctacaaggaggcggcgcggctggccgaggtcggaactga 119
Query: 1667 gctcgtggtcagccgcatagagaggttggggcttcgggtcagaatcgacaagaccgaagc 1726
|||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 120 cctcgtgatcagccgcatagagaggttggggcttcggttcagaatcgacaaaaccgaagc 179
Query: 1727 cctcctcttccgcgggactgggcggaaaggacccccgccgggtgccaccctcctcatagg 1786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 cctcctcttccgcgggactgggcggaaaggacccccgccgggtgccaccctcctcatagg 239
Query: 1787 aggagggagggtcagggtgagccctaccatgaaatatctggggctcacccttgacggagg 1846
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 240 aggagggagggtcagggtgagcccgaccatgaaatacctggggctcacccttgacggagg 299
Query: 1847 gtggaccttcgtgccccatttcagggagttggggccgaaggtcatgaggacggcaggtgc 1906
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 300 gtggaccttcgtggcccatttcagggagttggggccgaaggtcatgaggatggcaggtgc 359
Query: 1907 gctggggaaattcctcccgaacctcggaggacccagcgcagcttgcaggcggctatactc 1966
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tctgggaaaattcctcccgaacctcggaggacccagcgcagcttgcaggcggctatactc 419
Query: 1967 tggggtctgtcggagtatagccacgtacggtgctcccgtttgggctgatcgaccgatgag 2026
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 420 tggggtctgtcggagtatagccacgtacggtgctcccgtttgggctgatcgcccgatgag 479
Query: 2027 ccgcggggtcaaggccctactgcgctcggcgcaaagggcacccgcggtgagggtgattag 2086
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 480 ccgcggggtcaaggccctactgcgctcggcgcaaagggcacccgcggtgagggtggttag 539
Query: 2087 ggggtaccgtacggtctcctgggccgcagcgacggctcttgccggcgatccgccttggga 2146
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 540 ggggtatcgtacggtctcctgggccgcagcgacgactcttgccggcgatccgccttggga 599
Query: 2147 tcttgtggcgtcggttctcgccgaggtgttctcctacgtctcgggtaggagggctctcgg 2206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tcttgtggcgtcggttctcgccgaggtgttctcctacgtctcgggtaggagggctctcgg 659
Query: 2207 agagaacccttcatcagaggagatccgggcggttcgccggcagggggagtcacgtcttat 2266
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 660 agagaacccttcatcagaagagatccgggcggttcgccagcagggggagtcacgtcttat 719
Query: 2267 gc 2268
||
Sbjct: 720 gc 721
>BF01030A1D08
Length = 767
Score = 1154 bits (582), Expect = 0.0
Identities = 601/608 (98%)
Strand = Plus / Plus
Query: 458 ggtacaggtcccgatgctttgcgaagtgtgacgcatcatcacgatgcagacatgttggtt 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 ggtacaggtcccgatgctttgcgaagtgtgacgcatcatcacgatgcagacatgttggtt 219
Query: 518 cctcgcactcctcttgtgctatttcgtgaaagacatatgcggcagttgggaagaatggtg 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 cctcgcactcctcttgtgctatttcgtgaaagacatatgcggcagttgggaagaatggtg 279
Query: 578 gacatacgacggaatatcaggtccgggtttctggggtctaatcaatccgcaatggaacat 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gacatacgacggaatatcaggtccgggtttctggggtctaatcaatccgcaatggaacat 339
Query: 638 gtgtaacaagggccggcggcagagtcccgtcaacatagaacccgataaattactctttga 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gtgtaacaagggccggcggcagagtcccgtcaacatagaacccgataaattactctttga 399
Query: 698 cccctggctgagagacatacagtttgataaacataaggtcagcggtgttcttcaaaacac 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cccctggctgagagacatacagtttgataaacataaggtcagcggtgttcttcaaaacac 459
Query: 758 tggccaatcactggtcttccgagtcgaaaaggacagcaaacaccaggtcaacattagcgg 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tggccaatcactggtcttccgagtcgaaaaggacagcaaacaccaggtcaacattagcgg 519
Query: 818 tgggccactgtcttacagataccagttcgaggagatatatttccattatggtttggaaga 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tgggccactgtcttacagataccagttcgaggagatatatttccattatggtttggaaga 579
Query: 878 caaccggggctctgaacaccagattgatcatcatacctttcctggagagatacagttata 937
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 580 caaccggggctctgaacaccagattgatcatcatacctttcctggagagatacaattata 639
Query: 938 cggcttcaacaaggaattatatcataacatgtcagaagcgcaacacaagtcccagggggt 997
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 640 tggcttcaacaaggaattatatcataacatgtcggaagcacaacacaagtcccagggggt 699
Query: 998 ggtaggaatatcactaatggttcaaataggagaacctactaataaggaactgcgtcttat 1057
|||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 700 ggtaggaatatcactaatggttcaaatannagaaccaactaataaggaactgcgtcttat 759
Query: 1058 aaccagcg 1065
||||||||
Sbjct: 760 aaccagcg 767
>BF01037B1H08
Length = 758
Score = 81.8 bits (41), Expect = 6e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 128 ttcgaaacctggcaagtgccaatgtgatcttttcctagtcatatgtact 176
||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 123 ttcgaaacctggcaagtaccaatgtgatcttttccgagtcatatgtact 171
>BF01056B1D02
Length = 778
Score = 75.8 bits (38), Expect = 4e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 131 gaaacctggcaagtgccaatgtgatcttttcctagtcatatgtact 176
|||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 510 gaaacctggcaagtaccaatgtgatcttttccgagtcatatgtact 555
>BF01023A2A12
Length = 723
Score = 67.9 bits (34), Expect = 1e-10
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 131 gaaacctggcaagtgccaatgtgatcttttcctagtcatatgtact 176
|||||||||||||| ||||||||||||||||| ||||| |||||||
Sbjct: 105 gaaacctggcaagtaccaatgtgatcttttccgagtcacatgtact 150
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 357,558
Number of extensions: 31492
Number of successful extensions: 31492
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 31492
Number of HSP's successfully gapped: 5
Length of query: 3262
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3244
Effective length of database: 8,109,745
Effective search space: 26308012780
Effective search space used: 26308012780
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)