BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18233 (UTR included)
(1246 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_736_C1 123 7e-28
BF01020B1H07 88 4e-17
BF01011A1B08 88 4e-17
BF01052B2H04 74 6e-13
BF01059B2F03 68 4e-11
BF01059A2H01 68 4e-11
>BF14_736_C1
Length = 796
Score = 123 bits (62), Expect = 7e-28
Identities = 104/118 (88%)
Strand = Plus / Plus
Query: 1120 agttactagagttcgtacatgggctggctcgaccggggaagtaccacgctctcacagaag 1179
|||||||| || ||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 607 agttactacagctcgaacatgggctggctcgaccggggaagtaccaccctctcacagaag 666
Query: 1180 ttcggcgtgaaatagtcattaatggcagcatttcatcccatgagtaagaaagccggtt 1237
|||||||||| ||||| ||| |||| || |||| ||| |||||| ||| ||||||||
Sbjct: 667 atcggcgtgaagtagtctttagtggctgcgtttcgtccaatgagtgagagagccggtt 724
>BF01020B1H07
Length = 733
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 1136 acatgggctggctcgaccggggaagtaccacgctctcacagaagttcggcgtgaaatagt 1195
||||||||||||||||| ||| |||||||| |||||||||||| |||||||||| ||||
Sbjct: 101 acatgggctggctcgacggggcaagtaccatcctctcacagaagatcggcgtgaagtagt 42
Query: 1196 cattaatg 1203
||||||||
Sbjct: 41 cattaatg 34
>BF01011A1B08
Length = 853
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 1136 acatgggctggctcgaccggggaagtaccacgctctcacagaagttcggcgtgaaatagt 1195
||||||||||||||||| ||| |||||||| |||||||||||| |||||||||| ||||
Sbjct: 139 acatgggctggctcgacggggcaagtaccatcctctcacagaagatcggcgtgaagtagt 80
Query: 1196 cattaatg 1203
||||||||
Sbjct: 79 cattaatg 72
>BF01052B2H04
Length = 668
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 1136 acatgggctggctcgaccggggaagtaccacgctctcacagaagttcgg 1184
||||||||||||||| ||||||||||||||| |||||||||||| ||||
Sbjct: 434 acatgggctggctcgtccggggaagtaccaccctctcacagaagctcgg 386
>BF01059B2F03
Length = 703
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 1136 acatgggctggctcgaccggggaagtaccacgctctcacagaagttcggcgtgaaatagt 1195
|||||||||||||||| ||||||| ||||| | |||||||||| |||||||||| |||
Sbjct: 90 acatgggctggctcgagcggggaatgaccaccccctcacagaagatcggcgtgaagtagc 31
Query: 1196 cattaatggc 1205
| ||||||||
Sbjct: 30 ctttaatggc 21
>BF01059A2H01
Length = 865
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 1136 acatgggctggctcgaccggggaagtaccacgctctcacagaagttcggcgtgaaatagt 1195
||||| ||||||| ||||| ||||||||||| |||||||||||| ||||| || | ||||
Sbjct: 311 acatgagctggcttgaccgtggaagtaccaccctctcacagaagatcggcatggagtagt 252
Query: 1196 cattaatggc 1205
| ||||||||
Sbjct: 251 ctttaatggc 242
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 177,109
Number of extensions: 3460
Number of successful extensions: 3460
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 3460
Number of HSP's successfully gapped: 6
Length of query: 1246
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1229
Effective length of database: 8,119,229
Effective search space: 9978532441
Effective search space used: 9978532441
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)