BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18269 (UTR included)
(2629 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009A1G05 1029 0.0
BF01030A1E06 502 e-141
>BF01009A1G05
Length = 821
Score = 1029 bits (519), Expect = 0.0
Identities = 531/535 (99%)
Strand = Plus / Plus
Query: 1110 tatacgcagaatctcaaagcagctgaggaaaacgcccaacaagaaaagctgagaaacttt 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tatacgcagaatctcaaagcagctgaggaaaacgcccaacaagaaaagctgagaaacttt 71
Query: 1170 atcatggaacaaaacgctaaggagtaccaatatcgtccgacgcctctccaattccccttc 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atcatggaacaaaacgctaaggagtaccaatatcgtccgacgcctctccaattccccttc 131
Query: 1230 ggaagtagccccgatgtgttcagggctctacccgggaagacctgggatgtcaacaatcta 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ggaagtagccccgatgtgttcagggctctacccgggaagacctgggatgtcaacaatcta 191
Query: 1290 ggagtcatcccatctatgcaagtttccaatgaccttcgacctgaacccgtcaaacggacc 1349
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 192 ggaatcatcccatctatgcaagtttccaatgatcttcgacctgaacccgtcaaacggacc 251
Query: 1350 tacgacccaatgctccagactaatgttatcagcacatcggactacgaccgtgacggtcag 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tacgacccaatgctccagactaatgttatcagcacatcggactacgaccgtgacggtcag 311
Query: 1410 atcatcagtgaggaggaatacgaagagatgatggacaaactccgcgccgctgactcgctc 1469
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 312 atcatcagtgaggaggaatacgaagagatgatggacaaactccgcgctgccgactcgctc 371
Query: 1470 tacacggagtataccctcgaagaaattatatatcaactggcgaagatgatgttctcccag 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tacacggagtataccctcgaagaaattatatatcaactggcgaagatgatgttctcccag 431
Query: 1530 tctttgtaccgctctccatcatcagcgcgcgccgccacacagcggttcatgaccttccta 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tctttgtaccgctctccatcatcagcgcgcgccgccacacagcggttcatgaccttccta 491
Query: 1590 gagctggaggccgagcggggacagctgtcgaggaccatcgagaagaaggttttgg 1644
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gagctggaggccgagcggggacagctgtcgaggaccatcgagaagaaggttttgg 546
Score = 969 bits (489), Expect = 0.0
Identities = 526/539 (97%), Gaps = 5/539 (0%)
Strand = Plus / Plus
Query: 1645 gcacatcggactacgaccgtgacggtcagatcatcagtgaggaggaatacgaagagatga 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gcacatcggactacgaccgtgacggtcagatcatcagtgaggaggaatacgaagagatga 342
Query: 1705 tggacaaactccgcgccgctgactcgctctacacggagtataccctcgaagaaattatat 1764
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tggacaaactccgcgctgccgactcgctctacacggagtataccctcgaagaaattatat 402
Query: 1765 atcaactggcgaagatgatgttctcccagtctttgtaccgctctccatcatcagcgcgcg 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 atcaactggcgaagatgatgttctcccagtctttgtaccgctctccatcatcagcgcgcg 462
Query: 1825 ccgccacacagcggttcatgaccttcctagagctggaggccgagcggggacagttgtcga 1884
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 463 ccgccacacagcggttcatgaccttcctagagctggaggccgagcggggacagctgtcga 522
Query: 1885 ggaccatcgagaagaaggttttggatgttatgatggcagctctaacggacacgatcggtg 1944
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 523 ggaccatcgagaagaaggttttggatgtaatgatggcagctctaacggacacgatcggtg 582
Query: 1945 accatcccgagttacttcaagcgcgagacggtcttggtatcgctcctgctaatcgaataa 2004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 accatcccgagttacttcaagcgcgagacggtcttggtatcgctcctgctaatcgaataa 642
Query: 2005 tgaatcaatttctggaaacgagtgcgtcggagccgagtatgtcacgcgcaattctcgcgg 2064
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 643 tgaatcaatttctggaaacgagtgcgtcggagccgagtatgtcacgcgccattctcgcgg 702
Query: 2065 cttacaaggacgaactactcaaaggacccccattgcacaaactgggcttcacagaccgaa 2124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 cttacaaggacgaattactcaaaggacccccattgcacaaactgggcttcacagaccgaa 762
Query: 2125 actaaatgtaaaactaaata-----aaaatcttcattattgtaatttattttatttatt 2178
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 763 actaaatgtaaaactnnataaaaataaaatcttcattattgtaatttattttatttatt 821
>BF01030A1E06
Length = 729
Score = 502 bits (253), Expect = e-141
Identities = 253/253 (100%)
Strand = Plus / Minus
Query: 2377 taaaaaaaatatgtgtccaaaatagttgtaaaatatcaagttatttattccaaaaatctt 2436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 taaaaaaaatatgtgtccaaaatagttgtaaaatatcaagttatttattccaaaaatctt 670
Query: 2437 gaatctatatttacaaaaactatttaaaaatgctaatggcttttagagaattatagcaag 2496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gaatctatatttacaaaaactatttaaaaatgctaatggcttttagagaattatagcaag 610
Query: 2497 ttttatcagattttattatatgtataataaaggtgcttacaggtatattcataaaaatta 2556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ttttatcagattttattatatgtataataaaggtgcttacaggtatattcataaaaatta 550
Query: 2557 cctctggtatatatttttttccatacctacttcaaataccaaagacatgttaaatttata 2616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 cctctggtatatatttttttccatacctacttcaaataccaaagacatgttaaatttata 490
Query: 2617 gaaatctgtcgtc 2629
|||||||||||||
Sbjct: 489 gaaatctgtcgtc 477
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 343,959
Number of extensions: 8163
Number of successful extensions: 8163
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8162
Number of HSP's successfully gapped: 3
Length of query: 2629
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2612
Effective length of database: 8,119,229
Effective search space: 21207426148
Effective search space used: 21207426148
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)