BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18284 (UTR included)
(1474 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060A2H11 1479 0.0
>BF01060A2H11
Length = 815
Score = 1479 bits (746), Expect = 0.0
Identities = 791/806 (98%)
Strand = Plus / Plus
Query: 140 ttaattaaataatattaataaaatttaaatacaacataattcacactttacacaaaataa 199
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 10 ttaattaaataatattaataaaatttaaatacaacataattcacattttacacaaaataa 69
Query: 200 atgagtgtagtattatttgtgaccatgtcataagaccggcgttacatatttaaccttaaa 259
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 70 atgagtctagtattatttgtgacaatgtcataagaccggcgttacatatttaaccttaaa 129
Query: 260 gttaatttttttcaactaaacatgggtgtaacggtgtatgtattaaacattaaacaaaaa 319
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gttaaattttttcaactaaacatgggtgtaacggtgtatgtattaaacattaaacaaaaa 189
Query: 320 ccacatactttttactttataatttatttgtatttgcttcagtttacagcaatatccggt 379
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ccacatactttttacattataatttatttgtatttgcttcagtttacagcaatatccggt 249
Query: 380 tcctgaaaataaaaccggtacctatgttatagatttactgacaaaaagaattttagctct 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tcctgaaaataaaaccggtacctatgttatagatttactgacaaaaagaattttagctct 309
Query: 440 gggtgctacacaggcaggacaattcctagtcgactgtgaaagttacttatcacatccgac 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gggtgctacacaggcaggacaattcctagtcgactgtgaaagttacttatcacatccgac 369
Query: 500 tatgggttcaacaaagacagtacatattttacataattcagaacaaccagcatctgtatt 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tatgggttcaacaaagacagtacatattttacataattcagaacaaccagcatctgtatt 429
Query: 560 ttcaatacttgagagtggtacaaagaatattcatgtaatcgccgatggactatttgatct 619
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 430 ttcaatacttgagagtggtacaaagaatattcatgtaattgctgatggactatttgatct 489
Query: 620 gctcatgatgaagctttcacaacattacacatccaagaaacaaaccaagatagaaagcaa 679
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 490 gctcatgatgaagctttcacaacattacacatccaagaaacaaaccaagatagagagcaa 549
Query: 680 aggtcccaagtttgaactcggagatttctgcattaaactcggctctgttacaatgaatca 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aggtcccaagtttgaactcggagatttctgcattaaactcggctctgttacaatgaatca 609
Query: 740 gaattttaaaggcatacttatagaggtagaatatcgtccctgtgtcatggcgaatgccgt 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 610 gaattttaaaggcatacttatagaggtagaatatcgtccctgtgtcatggcgaatgcggt 669
Query: 800 gtggggattattacgggagttcctacagggaattcttggttcaacgataaccgttcagcc 859
|||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 670 atggggattattacgagagttcctacagggaattcttggttcgacgataaccgttcagcc 729
Query: 860 tccgcagcacttactgagtagaatgaatgagatatacacaccgattgacactatatatca 919
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gccacagcacttactgagcagaatgaatgagatatacacaccgattgacactatatatca 789
Query: 920 atatttagaacattttagcgcctacc 945
||||||||||||||||||||||||||
Sbjct: 790 atatttagaacattttagcgcctacc 815
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 257,315
Number of extensions: 6442
Number of successful extensions: 6442
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6442
Number of HSP's successfully gapped: 1
Length of query: 1474
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1457
Effective length of database: 8,119,229
Effective search space: 11829716653
Effective search space used: 11829716653
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)