BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18312 (UTR included)
(1439 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1967_C1 1291 0.0
>BF14_1967_C1
Length = 846
Score = 1291 bits (651), Expect = 0.0
Identities = 663/667 (99%)
Strand = Plus / Plus
Query: 446 tcatgaacatctttcgaaatgttgcgttactaaattttggctacacattatcgtgatgta 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcatgaacatctttcgaaatgttgcgttactaaattttggctacacattatcgtgatgta 60
Query: 506 cttattcaaaagacagagacctgatttaaaggcaatatgcactttagtacaaaagttcag 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttattcaaaagacagagacctgatttaaaggcaatatgcactttagtacaaaagttcag 120
Query: 566 catagcgaagaagtcgcattatgaagttttaaatgtacgaaagaactgtacagaaaagga 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catagcgaagaagtcgcattatgaagttttaaatgtacgaaagaactgtacagaaaagga 180
Query: 626 gattaaagatgcattcattaagcttagcaaagagtatcatccagacaagaataagagttc 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gattaaagatgcattcattaagcttagcaaagagtatcatccagacaagaataagagttc 240
Query: 686 ccaagcacaacaacagtttgtggagatagttgaagcttacaatgtcctcagcaagcccgg 745
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 ccaagcacaacaacagtttgtggagatagttgaagcttacaatgtcctgagcaagcccgg 300
Query: 746 cagtcggtccagatatgatttaaatagccaccatactagtaactcaaatgtttataaaac 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagtcggtccagatatgatttaaatagccaccatactagtaactcaaatgtttataaaac 360
Query: 806 atatccttcttatgactataagtacaaagcttacagtaatcaatactataataactatac 865
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 361 atatccttcttatgactataagtacaaagcttacaataatcaatactataataactatac 420
Query: 866 aaataataattcaaccaatcagaatcagacatcggatgcatattatggactgaaaggaat 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaataataattcaaccaatcagaatcagacatcggatgcatattatggactgaaaggaat 480
Query: 926 tcggaaagtaccaaatgtagtcatcatcatgatttgttttggtgttgccattgtcggatt 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcggaaagtaccaaatgtagtcatcatcatgatttgttttggtgttgccattgtcggatt 540
Query: 986 atttttacaaatactcgttataagccgctcttaccactttcatagaaaaaggatagatga 1045
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atttttacaaatacttgttataagccgctcttaccactttcatagaaaaaggatagatga 600
Query: 1046 gaaatctataaggttggctgaagagttggaaaaagtgagagcatctgctaggggaaaaac 1105
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 601 gaaatctataaggttggctgaagagttggaaaaagtgagagcatctgctagaggaaaaac 660
Query: 1106 taatgaa 1112
|||||||
Sbjct: 661 taatgaa 667
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 262,318
Number of extensions: 6602
Number of successful extensions: 6602
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6602
Number of HSP's successfully gapped: 1
Length of query: 1439
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1422
Effective length of database: 8,119,229
Effective search space: 11545543638
Effective search space used: 11545543638
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)