BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18346 (UTR included)
(2182 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01018B2C09 1388 0.0
>BF01018B2C09
Length = 708
Score = 1388 bits (700), Expect = 0.0
Identities = 706/708 (99%)
Strand = Plus / Plus
Query: 366 tgtagtatatgattactaattaaaagattgcgatgagccataattacatacaaatattct 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtagtatatgattactaattaaaagattgcgatgagccataattacatacaaatattct 60
Query: 426 gtgagccttcacgaagtgtatattatttgaattaagttatcaaatatttacacgaggaaa 485
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgcgccttcacgaagtgtatattatttgaattaagttatcaaatatttacacgaggaaa 120
Query: 486 gacttatttaaaaatatgcagtcaattgaaaaaaagggtaaaacagtggatctagcatcc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacttatttaaaaatatgcagtcaattgaaaaaaagggtaaaacagtggatctagcatcc 180
Query: 546 ttagaaccagcagctagggttaagcagttggcgaactatggggcaatggtagatgttgat 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttagaaccagcagctagggttaagcagttggcgaactatggggcaatggtagatgttgat 240
Query: 606 ccaaacgttcctcctagaaggtattatcgatctggattagaaatggtgaggatggcaaat 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccaaacgttcctcctagaaggtattatcgatctggattagaaatggtgaggatggcaaat 300
Query: 666 gtgtatctagctgagggcagcttagaaaacgcttatatattatacatgaagtttatgacc 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtgtatctagctgagggcagcttagaaaacgcttatatattatacatgaagtttatgacc 360
Query: 726 ctgtttgtagagaagattcggaaacacccagagtacaacactgtgccatcagaagttaaa 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgtttgtagagaagattcggaaacacccagagtacaacactgtgccatcagaagttaaa 420
Query: 786 gcggtcaatcagagtaaactaaaagaagttatgccaaaggcagaaaagttaaagcaaaag 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcggtcaatcagagtaaactaaaagaagttatgccaaaggcagaaaagttaaagcaaaag 480
Query: 846 ttgttagatgtctatgctaaagaacacactctatatattgaaaatgaggcaaagagaaaa 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgttagatgtctatgctaaagaacacactctatatattgaaaatgaggcaaagagaaaa 540
Query: 906 atagcagaggaggcaagaagaaagcaagagcaagaagatgcgaaagtcgctcaaagactt 965
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atagcggaggaggcaagaagaaagcaagagcaagaagatgcgaaagtcgctcaaagactt 600
Query: 966 caagccgatgagaacagacaagatggtcacagcactacaccatatttattacatgcggat 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caagccgatgagaacagacaagatggtcacagcactacaccatatttattacatgcggat 660
Query: 1026 caatgggctgtgacaccaacagcacctccggtggatgatgtgttgtat 1073
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caatgggctgtgacaccaacagcacctccggtggatgatgtgttgtat 708
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 264,835
Number of extensions: 5653
Number of successful extensions: 5653
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5653
Number of HSP's successfully gapped: 1
Length of query: 2182
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2165
Effective length of database: 8,119,229
Effective search space: 17578130785
Effective search space used: 17578130785
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)